Ss1.1-reje02b_b12.5
|
GCGCCGCCGGCTCGGTTTGCGTCGGCGTGTACTGCGGCCTCTCCCGCTGCTTCTGGTACC
CTCCCAGCCCGGACCGGAGCGCGCCCCCGCGAGTCATGGCGACGAAGGCCGTGTGTGTGC
TGAAGGGCGACGGCCCGGTGCAGGGCACCATCTACTTCGAGCTGAAGGGAGAGAAGACAG
TGTTAGTAACGGGAACCATTAAAGGACTGGCTGAAGGTGATCATGGATTCCATGTCCATC
AGTTTGGAGATAATACACAAGGCTGTACCAGTGCAGGTCCTCACTTCAATCCTGAATCCA
AAAAACATGGTGGGCCAAAGGATCAAGAGAGGCACGTTGGAGACCTGGGCAATGTGACTG
CTGGCAAAGATGGTGTGGCCACTGTGTACATCGAAGATTCTGTGATCGCCCTCTCGGGAG
ACCATTCCATCATTGGCCGCACAATGGTGGTCCATGAAAAACCAGATGACTTGGGCAGAG
GTGGAAATGAAGAAAGTACAAAGACGGGAAATGCTGGAAGTCGTTTGGCCTGTGGTGTAA
TTGGGATCACCCAGTAAACATTCCCTCATGCCATGGTCTGAATGCCAGTAACTCATCTGT
TATCTTGCTAGTTGTAGTTGTAGAAATTTAACTTGATAAACATTAAACACTGTAACCTTA
GAAGTGTTAATTTGTGTGACTTTTAAAAATTGCTTTAAGTACCTATAATGAGAACTGATT
TACGAACACTTGGAAGATGTGTATAATTTTATAAAACTCAGACGTAATTAAAATGTCTAT
TTCAGTGATCTCTGTACCTTGCCAGACTTAATCACATATGAATATTAAACTTAGTTGTCT
GAATTTCTCCAGTTCTCACTCAAGCCTGCAATAAACAAATACTCTCTAAAAAAAAAAAAA
TTGAGCCTATTAAAGTATCTACAT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCGCCGCCGGCTCGGTTTGCGTCGGCGTGTACTGCGGCCTCTCCCGCTGCTTCTGGTACC
CTCCCAGCCCGGACCGGAGCGCGCCCCCGCGAGTCATGGCGACGAAGGCCGTGTGTGTGC
TGAAGGGCGACGGCCCGGTGCAGGGCACCATCTACTTCGAGCTGAAGGGAGAGAAGACAG
TGTTAGTAACGGGAACCATTAAAGGACTGGCTGAAGGTGATCATGGATTCCATGTCCATC
AGTTTGGAGATAATACACAAGGCTGTACCAGTGCAGGTCCTCACTTCAATCCTGAATCCA
AAAAACATGGTGGGCCAAAGGATCAAGAGAGGCACGTTGGAGACCTGGGCAATGTGACTG
CTGGCAAAGATGGTGTGGCCACTGTGTACATCGAAGATTCTGTGATCGCCCTCTCGGGAG
ACCATTCCATCATTGGCCGCACAATGGTGGTCCATGAAAAACCAGATGACTTGGGCAGAG
GTGGAAATGAAGAAAGTACAAAGACGGGAAATGCTGGAAGTCGTTTGGCCTGTGGTGTAA
TTGGGATCACCCAGTAAACATTCCCTCATGCCATGGTCTGAATGCCAGTAACTCATCTGT
TATCTTGCTAGTTGTAGTTGTAGAAATTTAACTTGATAAACATTAAACACTGTAACCTTA
GAAGTGTTAATTTGTGTGACTTTTAAAAATTGCTTTAAGTACCTATAATGAGAACTGATT
TACGAACACTTGGAAGATGTGTATAATTTTATAAAACTCAGACGTAATTAAAATGTCTAT
TTCAGTGATCTCTGTACCTTGCCAGACTTAATCACATATGAATATTAAACTTAGTTGTCT
GAATTTCTCCAGTTCTCACTCAAGCCTGCAATAAACAAATACTCTCTAAAAAAAAAAAAA
TTGAGCCTATTAAAGTATCTACAT
|
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
cbe (7.41627) |
|
cki (3.8004) |
|
fco (3.14416) |
|
lun (2.85929) |
|
spc (2.83415) |
|
tra (2.83112) |
|
sug (1.78208) |
|
ski (1.76082) |
|
cje (1.65235) |
|
mgp (1.61476) |
|
aor (1.56219) |
|
cte (1.4637) |
|
sto (1.43859) |
|
kid (1.42709) |
|
pgl (1.30332) |
|
fat (1.17942) |
|
cst (1.12029) |
|
lyg (1.06482) |
|
spl (1.00229) |
|
mga (0.96123) |
|
tes (0.831255) |
|
fce (0.814775) |
|
ova (0.774793) |
|
ret (0.7724) |
|
bla (0.746083) |
|
cmu (0.745573) |
|
nep (0.7357) |
|
lin (0.728014) |
|
gul (0.710353) |
|
csk (0.70373) |
|
sin (0.69979) |
|
rec (0.692281) |
|
duo (0.691204) |
|
che (0.68157) |
|
cut (0.679694) |
|
vin (0.665115) |
|
sme (0.610874) |
|
cag (0.604778) |
|
bfe (0.599431) |
|
med (0.58126) |
|
ssp (0.542079) |
|
ste (0.540833) |
|
mcp (0.511945) |
|
fhi (0.508733) |
|
nje (0.49776) |
|
ldo (0.485013) |
|
ebs (0.473205) |
|
isp (0.451128) |
|
liv (0.438853) |
|
nms (0.427716) |
|
cov (0.396458) |
|
nlu (0.383362) |
|
sag (0.36543) |
|
mgm (0.360685) |
|
fty (0.351679) |
|
ill (0.351185) |
|
ecc (0.345105) |
|
tbr (0.308356) |
|
cli (0.305623) |
|
nbm (0.297974) |
|
jej (0.296765) |
|
eje (0.296501) |
|
hyp (0.285673) |
|
pty (0.285429) |
|
hlv (0.278513) |
|
pla (0.267344) |
|
ute (0.265569) |
|
thg (0.253582) |
|
ece (0.229305) |
|
jca (0.22792) |
|
hea (0.204499) |
|
fcc (0.197785) |
|
fbs (0.175346) |
|
nco (0.161734) |
|
csp (0.161186) |
|
ctl (0.153069) |
|
eli (0.151814) |
|
lnt (0.142308) |
|
nmm (0.132802) |
|
cbr (0.127975) |
|
ese (0.126502) |
|
eep (0.122564) |
|
cly (0.120642) |
|
eru (0.120048) |
|
cty (0.10408) |
|
cbe (7.41627) |
|
cki (3.8004) |
|
fco (3.14416) |
|
lun (2.85929) |
|
spc (2.83415) |
|
tra (2.83112) |
|
sug (1.78208) |
|
ski (1.76082) |
|
cje (1.65235) |
|
mgp (1.61476) |
|
aor (1.56219) |
|
cte (1.4637) |
|
sto (1.43859) |
|
kid (1.42709) |
|
pgl (1.30332) |
|
fat (1.17942) |
|
cst (1.12029) |
|
lyg (1.06482) |
|
spl (1.00229) |
|
mga (0.96123) |
|
tes (0.831255) |
|
fce (0.814775) |
|
ova (0.774793) |
|
ret (0.7724) |
|
bla (0.746083) |
|
cmu (0.745573) |
|
nep (0.7357) |
|
lin (0.728014) |
|
gul (0.710353) |
|
csk (0.70373) |
|
sin (0.69979) |
|
rec (0.692281) |
|
duo (0.691204) |
|
che (0.68157) |
|
cut (0.679694) |
|
vin (0.665115) |
|
sme (0.610874) |
|
cag (0.604778) |
|
bfe (0.599431) |
|
med (0.58126) |
|
ssp (0.542079) |
|
ste (0.540833) |
|
mcp (0.511945) |
|
fhi (0.508733) |
|
nje (0.49776) |
|
ldo (0.485013) |
|
ebs (0.473205) |
|
isp (0.451128) |
|
liv (0.438853) |
|
nms (0.427716) |
|
cov (0.396458) |
|
nlu (0.383362) |
|
sag (0.36543) |
|
mgm (0.360685) |
|
fty (0.351679) |
|
ill (0.351185) |
|
ecc (0.345105) |
|
tbr (0.308356) |
|
cli (0.305623) |
|
nbm (0.297974) |
|
jej (0.296765) |
|
eje (0.296501) |
|
hyp (0.285673) |
|
pty (0.285429) |
|
hlv (0.278513) |
|
pla (0.267344) |
|
ute (0.265569) |
|
thg (0.253582) |
|
ece (0.229305) |
|
jca (0.22792) |
|
hea (0.204499) |
|
fcc (0.197785) |
|
fbs (0.175346) |
|
nco (0.161734) |
|
csp (0.161186) |
|
ctl (0.153069) |
|
eli (0.151814) |
|
lnt (0.142308) |
|
nmm (0.132802) |
|
cbr (0.127975) |
|
ese (0.126502) |
|
eep (0.122564) |
|
cly (0.120642) |
|
eru (0.120048) |
|
cty (0.10408) |
