Non-Coding RNA Search

Ss1.1-reje03b_h22.5

Sequence:


               
               TCCACTGAGCCACAACAGGAACTCCCTAAATATATTTGTTAATAAACCAATGGTTCTCCA
GACTTTTCAGCATACTGAGTGCTAAAGCAAACAAGAGATTCTTCTCAAAATATGTTGGTG
GCTTGAGAGATGTCATTACCAAGTGGTGATCTATACAGAAGGCATCAGTGTCCTTCAAGG
ATGTGACTGTGGAGTTTACCCAGGAGGAGGGGCAGCAGATGAGCCCTGCTCAGAGGATCC
TGTACAGAGATGTGATGCTGGAGAACTACAGCCACCTTGTGCCATTGCGTGAGCCTCCTT
TATCATGCAACCCTGCCTAGAGTGTGATCGGTTTTCTGTTTCTGCTTCTTTTAAAACCAC
CTATTTTGAGGGAAAATTAATGGAAAGTAAAATTCAGCAAATTTTTGTGTATCATTCAAT
GAATTTTTAAAAATGTGTCCGGCTCTATCACCAAAATCATGATACAAATGATTTCTCTCA
GAGGAAAATCTTCCTTATGCCTTCTTAATTAGTCCTCTCTTCCCAGCCATTTTCTTTTTC
TATTCTTTTTTCTTTTTTTTTTTAATTCCTGTTTTTGATAATCACCAATCTTCTCCCCAG
GTCAATACTTTCTCTTTCTTTGAAATTTCGTATAAATAGAATCAGACTTCATGTGCTCTT
TTTTCCTATGGCTTCTTTCCTTTAGTGTAATTCTTTTAGGATTCACGGATATTATTTTGT
GTATTATTATTATTCCTTTTATCAGTGAGTAATGTTCATTCTATGTCATGTCCTTCCAAT
TGCTGATAAGACATTATATTCCTTTTCCATTTGGTGCTTTCATAAGTAAAGGTGTCATGA
ATATTTCAGTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCACTGAGCCACAACAGGAACTCCCTAAATATATTTGTTAATAAACCAATGGTTCTCCA
GACTTTTCAGCATACTGAGTGCTAAAGCAAACAAGAGATTCTTCTCAAAATATGTTGGTG
GCTTGAGAGATGTCATTACCAAGTGGTGATCTATACAGAAGGCATCAGTGTCCTTCAAGG
ATGTGACTGTGGAGTTTACCCAGGAGGAGGGGCAGCAGATGAGCCCTGCTCAGAGGATCC
TGTACAGAGATGTGATGCTGGAGAACTACAGCCACCTTGTGCCATTGCGTGAGCCTCCTT
TATCATGCAACCCTGCCTAGAGTGTGATCGGTTTTCTGTTTCTGCTTCTTTTAAAACCAC
CTATTTTGAGGGAAAATTAATGGAAAGTAAAATTCAGCAAATTTTTGTGTATCATTCAAT
GAATTTTTAAAAATGTGTCCGGCTCTATCACCAAAATCATGATACAAATGATTTCTCTCA
GAGGAAAATCTTCCTTATGCCTTCTTAATTAGTCCTCTCTTCCCAGCCATTTTCTTTTTC
TATTCTTTTTTCTTTTTTTTTTTAATTCCTGTTTTTGATAATCACCAATCTTCTCCCCAG
GTCAATACTTTCTCTTTCTTTGAAATTTCGTATAAATAGAATCAGACTTCATGTGCTCTT
TTTTCCTATGGCTTCTTTCCTTTAGTGTAATTCTTTTAGGATTCACGGATATTATTTTGT
GTATTATTATTATTCCTTTTATCAGTGAGTAATGTTCATTCTATGTCATGTCCTTCCAAT
TGCTGATAAGACATTATATTCCTTTTCCATTTGGTGCTTTCATAAGTAAAGGTGTCATGA
ATATTTCAGTCC

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               160-535, gnl|bosTau2|chr8 (45148253-45148632)
               

               
               160-535, gnl|Hg17|chr9 (96686855-96686414)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               160-535, gnl|bosTau2|chr8 (45148253-45148632)
               

               
               160-535, gnl|Hg17|chr9 (96686855-96686414)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               pgl (0.118483)
               

               
               spc (0.113366)
               

               
               eje (0.0988338)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pgl (0.118483)
               

               
               spc (0.113366)
               

               
               eje (0.0988338)

	160-535, gnl\|bosTau2\|chr8 (45148253-45148632)
	160-535, gnl\|Hg17\|chr9 (96686855-96686414)