Non-Coding RNA Search

Ss1.1-reje04b_f15.5

Sequence:


               
               GAGATCAAAAGCGCTCCTTTAACTTTGCCTGGTTAACAGCTTGTGTCCGTGTCTTTGTCA
TGTTTCGTATGATTCTTAACCATTAAAGAACCTCCCGAATGTCTTCTGAACATTTTTATA
GTTCTGCTCTTGTCTCCTGAGGATGCTTCCTTATTTCCAGGAGTGTGTCAGCTGATGAAC
AGAATAGGAAAAGCCTAGCTGTGATTGCAGGAATAGTTCTCAGCCAGAGGAGAGTCTGCT
CTCTTGCAAAATGATGGCTGCTCTGTCATCCATGATTAGAAGGAAACTTGAGATCTGGGG
TTTTTTAAGATCCAAGAAAGATTATCTGGCCCAGTTTTATTGAGGAGACTGAAGCCCAGG
GAAGAGAAGGGAGTGCTCCCGTCTCAGAGCTAGCCCAGCGCCCTTTTCTTGCTTTCTGCT
GTCCCCCTGCGTTAGCTGGCCAGGTGTTTTAAAAGCCGCTCTAAGCAGCAGCCCAGAGGT
TTCATATAAGCTTGTCAATCCTTCTGATTTAAAATGTACAGCAATTTTTAAAGCGTTTTA
TTTTACTTTTTTTCTTTGTCTAACACGTTGTCATCCGACAATTTTTGTTGCCATGATTTC
TTGGCACCTGCAAACCGCAAGACGATTAACTGTGAACTCTTAATAAACAATGTTTGTTAA
TAATTTATATCCTTGACACTAGACAGAGCTTTCAGTGTTTTGCTTTTGTGATCTTTTTAA
AAATCTAATAGAAACAATGTATACTCTAGAAATTAAACACCTGTGTGCTATAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGATCAAAAGCGCTCCTTTAACTTTGCCTGGTTAACAGCTTGTGTCCGTGTCTTTGTCA
TGTTTCGTATGATTCTTAACCATTAAAGAACCTCCCGAATGTCTTCTGAACATTTTTATA
GTTCTGCTCTTGTCTCCTGAGGATGCTTCCTTATTTCCAGGAGTGTGTCAGCTGATGAAC
AGAATAGGAAAAGCCTAGCTGTGATTGCAGGAATAGTTCTCAGCCAGAGGAGAGTCTGCT
CTCTTGCAAAATGATGGCTGCTCTGTCATCCATGATTAGAAGGAAACTTGAGATCTGGGG
TTTTTTAAGATCCAAGAAAGATTATCTGGCCCAGTTTTATTGAGGAGACTGAAGCCCAGG
GAAGAGAAGGGAGTGCTCCCGTCTCAGAGCTAGCCCAGCGCCCTTTTCTTGCTTTCTGCT
GTCCCCCTGCGTTAGCTGGCCAGGTGTTTTAAAAGCCGCTCTAAGCAGCAGCCCAGAGGT
TTCATATAAGCTTGTCAATCCTTCTGATTTAAAATGTACAGCAATTTTTAAAGCGTTTTA
TTTTACTTTTTTTCTTTGTCTAACACGTTGTCATCCGACAATTTTTGTTGCCATGATTTC
TTGGCACCTGCAAACCGCAAGACGATTAACTGTGAACTCTTAATAAACAATGTTTGTTAA
TAATTTATATCCTTGACACTAGACAGAGCTTTCAGTGTTTTGCTTTTGTGATCTTTTTAA
AAATCTAATAGAAACAATGTATACTCTAGAAATTAAACACCTGTGTGCTATAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-767, gnl|bosTau2|chr18 (15837463-15836696)
               

               
               1-767, gnl|Hg17|chr16 (45671497-45670103)
               

               
               1-767, gnl|Mm7|chr8 (84228598-84227811)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-767, gnl|bosTau2|chr18 (15837463-15836696)
               

               
               1-767, gnl|Hg17|chr16 (45671497-45670103)
               

               
               1-767, gnl|Mm7|chr8 (84228598-84227811)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               fco (0.157208)
               

               
               eje (0.0988338)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.157208)
               

               
               eje (0.0988338)

	1-767, gnl\|bosTau2\|chr18 (15837463-15836696)
	1-767, gnl\|Hg17\|chr16 (45671497-45670103)
	1-767, gnl\|Mm7\|chr8 (84228598-84227811)