Ss1.1-reje04b_n18.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCCAGGGAGGAGGGCCCTGGCCGCTCTGTTGCGCGTGCTGATGTCAGCGGCTCAGTTCAT CGCGGCTCAACCATTTTTCCTTCCCTGGAATCGTTTGCCGTGCTTCCCTGCAGCATCTCA CCGTGTTGGGGGTTGGGGTGCCAGCTGCCAGGCGGGGTTTGGAAGCCTCGGGCTCTGGGT GTGCGGAGTGTGTTCATGTGGGTGTGTGTGTACATATGTGTATATAACTGAGGTGTCTGT ACGGAATGCCCTTTGGTAGCTCTGAGGTGGTCACCAGATTGTTTTGTAACGCTCCCCGCC CTTGCCTCGGTATTGCCAGTTTCTTGTGCAATAAACAATCAGCAGCTGAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCCAGGGAGGAGGGCCCTGGCCGCTCTGTTGCGCGTGCTGATGTCAGCGGCTCAGTTCAT CGCGGCTCAACCATTTTTCCTTCCCTGGAATCGTTTGCCGTGCTTCCCTGCAGCATCTCA CCGTGTTGGGGGTTGGGGTGCCAGCTGCCAGGCGGGGTTTGGAAGCCTCGGGCTCTGGGT GTGCGGAGTGTGTTCATGTGGGTGTGTGTGTACATATGTGTATATAACTGAGGTGTCTGT ACGGAATGCCCTTTGGTAGCTCTGAGGTGGTCACCAGATTGTTTTGTAACGCTCCCCGCC CTTGCCTCGGTATTGCCAGTTTCTTGTGCAATAAACAATCAGCAGCTGAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 135-242, - strand, RNAz p=0.940708 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 135-242, - strand, RNAz p=0.940708 |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 18-348, gnl|bosTau2|chr18 (30545601-30545934) | |
| 18-348, gnl|Hg17|chr16 (68532808-68533143) | |
| 18-348, gnl|Mm7|chr8 (106158407-106158738) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 18-348, gnl|bosTau2|chr18 (30545601-30545934) | |
| 18-348, gnl|Hg17|chr16 (68532808-68533143) | |
| 18-348, gnl|Mm7|chr8 (106158407-106158738) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| nca (0.273748) | |
| ill (0.175593) | |
| lnt (0.142308) | |
| eje (0.0988338) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nca (0.273748) | |
| ill (0.175593) | |
| lnt (0.142308) | |
| eje (0.0988338) |