Non-Coding RNA Search

Ss1.1-reje06b_g16.5.5

Sequence:


               
               CTGAACCGGAAGTTGCAGCACGCGGAGAAGGACAAGGAGGCCTTGGGCCCGGAAAGCAAG
CCTGAAAAGCAGCAGACGCCCAACAAGCGGCCCTGGGAGAGCCTCCGGAAAGCGCACGGG
CCACCCGCCTGGGTGAAGAAGGAGCTGGAGCCACTGCCGCCGTCGCCGCTGGAGCTGCGG
AGCGTGGAGTGGGAGAAGTCGGGCGCCACCATCCCGCTGGTGGGCCAGGACATCATTGAC
CTCCAGACCGAGGTCTGAGCAGGCCGGCGGCGGCCACGCACCGGGCCACGGAGGAGGGAA
GCTGCTCTGCCCGCTCCTGCCACAGGACGGGCGCAGACACGCTCGCGGGCGGCGGGCCAG
GCCCGCGCCCCAGCCTCAGGGCGCTCGGACGGCGGCCAGGCAGAGGCCCGCGGTGCTGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGAACCGGAAGTTGCAGCACGCGGAGAAGGACAAGGAGGCCTTGGGCCCGGAAAGCAAG
CCTGAAAAGCAGCAGACGCCCAACAAGCGGCCCTGGGAGAGCCTCCGGAAAGCGCACGGG
CCACCCGCCTGGGTGAAGAAGGAGCTGGAGCCACTGCCGCCGTCGCCGCTGGAGCTGCGG
AGCGTGGAGTGGGAGAAGTCGGGCGCCACCATCCCGCTGGTGGGCCAGGACATCATTGAC
CTCCAGACCGAGGTCTGAGCAGGCCGGCGGCGGCCACGCACCGGGCCACGGAGGAGGGAA
GCTGCTCTGCCCGCTCCTGCCACAGGACGGGCGCAGACACGCTCGCGGGCGGCGGGCCAG
GCCCGCGCCCCAGCCTCAGGGCGCTCGGACGGCGGCCAGGCAGAGGCCCGCGGTGCTGGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               49-420, gnl|bosTau2|chr14 (831382-831012)
               

               
               49-420, gnl|Hg17|chr8 (143622572-143622942)
               

               
               49-420, gnl|Mm7|chr15 (74669223-74669592)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               49-420, gnl|bosTau2|chr14 (831382-831012)
               

               
               49-420, gnl|Hg17|chr8 (143622572-143622942)
               

               
               49-420, gnl|Mm7|chr15 (74669223-74669592)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               hyp (0.142837)
               

               
               ebs (0.118301)
               

               
               eje (0.0988338)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hyp (0.142837)
               

               
               ebs (0.118301)
               

               
               eje (0.0988338)

	49-420, gnl\|bosTau2\|chr14 (831382-831012)
	49-420, gnl\|Hg17\|chr8 (143622572-143622942)
	49-420, gnl\|Mm7\|chr15 (74669223-74669592)