Non-Coding RNA Search

Ss1.1-reje08b_a4.5

Sequence:


               
               TCCAAGGGCAGCTTTCCCACCTCCCGGCGCAACAGCCTGCAGCGCTCTGAGCCCCTGGGC
CCTGGCATCATGCGAAGGAACTCCCTGAGTGGCAGCAGCACCGGCTCCCAGGAGCAGCGG
GCAAGCAAGGGGGTGACATTCGCCGGGGATGTTGGCAGGATGTGACTTCTGAACAGAAGC
CATGTGTCTCACCCACACCAGGGCCCACCATGGAGCTTGTGCTCTCAGAATCTGCTGACC
AACACAACTCTGCAAGGAAGACCTTGGCACTGAGGGAGTAGGAGGCCCAAGGGGCATGAA
GAGTGCTACTCCATTATAAGAGTCAAAGATGTTGGAGCTGTCTGCTGTGTGTAGAAGGCA
GAAGTCCTGCAGCCTACCATCCTCATCCTTGCCACTTCCCCAGCCAAGAGTCAACCACTA
AGCAATCCCACCAGAGCCCAGATGCTTCTAGGGGGCACACTCCCAGCTAGCTGAGCAGGA
GGAGGGGGTGTTCTCACACCAGAATTAGTAGCAGCCAATAAAAATGCTGGCGCCTAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCAAGGGCAGCTTTCCCACCTCCCGGCGCAACAGCCTGCAGCGCTCTGAGCCCCTGGGC
CCTGGCATCATGCGAAGGAACTCCCTGAGTGGCAGCAGCACCGGCTCCCAGGAGCAGCGG
GCAAGCAAGGGGGTGACATTCGCCGGGGATGTTGGCAGGATGTGACTTCTGAACAGAAGC
CATGTGTCTCACCCACACCAGGGCCCACCATGGAGCTTGTGCTCTCAGAATCTGCTGACC
AACACAACTCTGCAAGGAAGACCTTGGCACTGAGGGAGTAGGAGGCCCAAGGGGCATGAA
GAGTGCTACTCCATTATAAGAGTCAAAGATGTTGGAGCTGTCTGCTGTGTGTAGAAGGCA
GAAGTCCTGCAGCCTACCATCCTCATCCTTGCCACTTCCCCAGCCAAGAGTCAACCACTA
AGCAATCCCACCAGAGCCCAGATGCTTCTAGGGGGCACACTCCCAGCTAGCTGAGCAGGA
GGAGGGGGTGTTCTCACACCAGAATTAGTAGCAGCCAATAAAAATGCTGGCGCCTAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|26359050|dbj|BAC25198.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|26359050|dbj|BAC25198.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               162-482, gnl|bosTau2|chr19 (38942246-38941929)
               

               
               162-482, gnl|Hg17|chr17 (38202229-38202557)
               

               
               162-482, gnl|Mm7|chr11 (101386071-101386390)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               162-482, gnl|bosTau2|chr19 (38942246-38941929)
               

               
               162-482, gnl|Hg17|chr17 (38202229-38202557)
               

               
               162-482, gnl|Mm7|chr11 (101386071-101386390)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               fhi (0.169578)
               

               
               jca (0.11396)
               

               
               eje (0.0988338)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fhi (0.169578)
               

               
               jca (0.11396)
               

               
               eje (0.0988338)

	162-482, gnl\|bosTau2\|chr19 (38942246-38941929)
	162-482, gnl\|Hg17\|chr17 (38202229-38202557)
	162-482, gnl\|Mm7\|chr11 (101386071-101386390)