Ss1.1-reje08b_b11.5
Sequence: | Distiller database | More info |
Sequence: | Distiller database | Help | Less info |
GATTAAATTTAATTCTAAATATTCATCCAAAATATCCTCTTTATAAAGGGCACCGTAAAG TTTTCAGAAAATTAATTTCTTAGTATTCCTTCATAGATTCTCATTAGCATTTGAGAAGTC TGTAGACTTGATAGCAACTCTTTTGAAAGTCCAAATTATACTTGATCCTATTCACCCTTG TTCCTATGTTGGTTTTTTTAAGTTCCATTCAGCCATGCTCATATTTTCACCCCTTTGTGC AAAGTTGACTATTCTGCAAGCACTTTTTCTTGAGTATGCATCACATTTGTCTTCATGAAA AAAAGAACGAACACATCAGACACAATGTAAATTATCTATTTTGATTCACATTAGTTGTAA ACAGCATGGTTCATGAAGGCTTGATTTAAAGGAAGAGTATGTATTTGGGAAGGTCTTCTT AACATAATTATGACCTTGTAGCCTACAGGCATATTTTTTTTTTTCCACTTGTTTTTTACT CTGGAATTCAGGGGACAGTACAAGGCATTTTTAAAATTAGACTTTTGTTTTAGTTCACAT TTGCAAACTAACAAATAGCCACAGAGAGTTCACAAATGTTTTTCCAGATTAGTTCAGTAT TTTTTTCTTTTTAAGGAAAGAGTCTCTGCCTGTGTTAATAGAATAGTTCTAATCTACTAG |
Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
GATTAAATTTAATTCTAAATATTCATCCAAAATATCCTCTTTATAAAGGGCACCGTAAAG TTTTCAGAAAATTAATTTCTTAGTATTCCTTCATAGATTCTCATTAGCATTTGAGAAGTC TGTAGACTTGATAGCAACTCTTTTGAAAGTCCAAATTATACTTGATCCTATTCACCCTTG TTCCTATGTTGGTTTTTTTAAGTTCCATTCAGCCATGCTCATATTTTCACCCCTTTGTGC AAAGTTGACTATTCTGCAAGCACTTTTTCTTGAGTATGCATCACATTTGTCTTCATGAAA AAAAGAACGAACACATCAGACACAATGTAAATTATCTATTTTGATTCACATTAGTTGTAA ACAGCATGGTTCATGAAGGCTTGATTTAAAGGAAGAGTATGTATTTGGGAAGGTCTTCTT AACATAATTATGACCTTGTAGCCTACAGGCATATTTTTTTTTTTCCACTTGTTTTTTACT CTGGAATTCAGGGGACAGTACAAGGCATTTTTAAAATTAGACTTTTGTTTTAGTTCACAT TTGCAAACTAACAAATAGCCACAGAGAGTTCACAAATGTTTTTCCAGATTAGTTCAGTAT TTTTTTCTTTTTAAGGAAAGAGTCTCTGCCTGTGTTAATAGAATAGTTCTAATCTACTAG |
Aligned organism(s): 24 entry(ies) | More info |
Aligned organism(s): 24 entry(ies) | Help | Less info |
3-455, gnl|bosTau2|chr12 (31164993-31165436) | |
3-455, gnl|canFam2|chr22 (35530508-35531048) | |
3-455, gnl|dasNov1|scaffold_67181 (10264-9732) | |
3-455, gnl|hg17|chr13 (78785554-78786092) | |
3-455, gnl|Hg17|chr13 (78786243-78785786) | |
3-455, gnl|loxAfr1|scaffold_1700 (83723-83177) | |
3-455, gnl|mm7|chr14 (99537989-99538520) | |
3-455, gnl|Mm7|chr14 (99538663-99538245) | |
3-455, gnl|monDom2|scaffold_8 (17523280-17523737) | |
3-455, gnl|panTro1|chr14 (61440233-61440784) | |
3-455, gnl|rheMac2|chr17 (59819911-59820468) | |
3-455, gnl|rn3|chr15 (89181187-89181682) | |
499-652, gnl|bosTau2|chr12 (31165424-31165577) | |
499-652, gnl|canFam2|chr22 (35530508-35531048) | |
499-652, gnl|dasNov1|scaffold_67181 (10264-9732) | |
499-652, gnl|hg17|chr13 (78785554-78786092) | |
499-652, gnl|Hg17|chr13 (78785798-78785654) | |
499-652, gnl|loxAfr1|scaffold_1700 (83723-83177) | |
499-652, gnl|mm7|chr14 (99537989-99538520) | |
499-652, gnl|Mm7|chr14 (99538257-99538088) | |
499-652, gnl|monDom2|scaffold_8 (17523280-17523737) | |
499-652, gnl|panTro1|chr14 (61440233-61440784) | |
499-652, gnl|rheMac2|chr17 (59819911-59820468) | |
499-652, gnl|rn3|chr15 (89181187-89181682) |
Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
3-455, gnl|bosTau2|chr12 (31164993-31165436) | |
3-455, gnl|canFam2|chr22 (35530508-35531048) | |
3-455, gnl|dasNov1|scaffold_67181 (10264-9732) | |
3-455, gnl|hg17|chr13 (78785554-78786092) | |
3-455, gnl|Hg17|chr13 (78786243-78785786) | |
3-455, gnl|loxAfr1|scaffold_1700 (83723-83177) | |
3-455, gnl|mm7|chr14 (99537989-99538520) | |
3-455, gnl|Mm7|chr14 (99538663-99538245) | |
3-455, gnl|monDom2|scaffold_8 (17523280-17523737) | |
3-455, gnl|panTro1|chr14 (61440233-61440784) | |
3-455, gnl|rheMac2|chr17 (59819911-59820468) | |
3-455, gnl|rn3|chr15 (89181187-89181682) | |
499-652, gnl|bosTau2|chr12 (31165424-31165577) | |
499-652, gnl|canFam2|chr22 (35530508-35531048) | |
499-652, gnl|dasNov1|scaffold_67181 (10264-9732) | |
499-652, gnl|hg17|chr13 (78785554-78786092) | |
499-652, gnl|Hg17|chr13 (78785798-78785654) | |
499-652, gnl|loxAfr1|scaffold_1700 (83723-83177) | |
499-652, gnl|mm7|chr14 (99537989-99538520) | |
499-652, gnl|Mm7|chr14 (99538257-99538088) | |
499-652, gnl|monDom2|scaffold_8 (17523280-17523737) | |
499-652, gnl|panTro1|chr14 (61440233-61440784) | |
499-652, gnl|rheMac2|chr17 (59819911-59820468) | |
499-652, gnl|rn3|chr15 (89181187-89181682) |
Expressed library(ies): 2 entry(ies) | More info |
Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
sin (0.174948) | |
eje (0.0988338) |