Ss1.1-reje08b_d8.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGGAGGCAGCGCTCCGGCGGCTCCGCGCCCCGCACTCCCGGACCCGAAGCCGGGAAGTTA AATAATGGCAGAGACAAGTCTGTTAGAGGCCGGGGCCTCTGCAGCCTCCACAGCTGCAGC GCTGGAGAACTTACAGGTGGAGGCAAGTTGTTCTGTGTGCCTGGAGTATCTGAAGGAGCC TGTCATCATTGAGTGTGGGCACAACTTCTGCAAAGCTTGCATCACCCGCTGGTGGGAGGA CCTAGAGAGGGACTTCCCTTGCCCTGTCTGTCGAAAGACATCCCGCTACCGCAGCCTCCG GCCTAATCGACAGCTGGGCAGTATGGTGGAAATTGCCAAGCAGCTCCAAGCTGTCAAGCG GAAGATCCGAGATGAGAGCCTCTGCCCCCAGCACCACGAGGCCCTCAGCCTCTTCTGCTA TGAGGACCAGGAGGCTGTCTGTTTGATATGTGCAATTTCCCACACTCACCGGGCCCATAC CGTTGTGCCACTGGATGATGCCACCCAGGAGTACAAGGAAAAACTGCAGAAGTGCCTGGA GCCCCTGGAGCAGAAGCTGCAGGAGATCACCCGCTGCAAGTCCTCTGAGGAGAAGAAGCC TGGCGAACTCAAGAGGCTAGTGGAGAGTCGCCGACAGCAGATCCTAAAGGAATTTGAAGA GCTTCATCGGCGGCTGGATGAAGAGCAGCAGGTGTTGCTTTCACGACTGGAGGAGGAGGA ACAGGACATTCTTCAGCGCCTCCGAGAAAACGCTGCTCACCTTGGAGACAAGCGCCGGGA CCTGGCCCACTTGGCTGCGGAGGTGGAGGGCAAGTGCTTACAGTCGGGCTTCGAGATGCT TAAGGATGTCAAAAGTACCCTGGAAAAATGTGAGAAGGTGAAGACCATGGAGGTGACTTC AGTGTCAATAGAGCTGGAAAAGAACTTCAGCAATTTCCCCCGACAGTACTTTGCCCTAAG GAAAATCCTTAAACAGCTAATTGCGGATGTGACCCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGGAGGCAGCGCTCCGGCGGCTCCGCGCCCCGCACTCCCGGACCCGAAGCCGGGAAGTTA AATAATGGCAGAGACAAGTCTGTTAGAGGCCGGGGCCTCTGCAGCCTCCACAGCTGCAGC GCTGGAGAACTTACAGGTGGAGGCAAGTTGTTCTGTGTGCCTGGAGTATCTGAAGGAGCC TGTCATCATTGAGTGTGGGCACAACTTCTGCAAAGCTTGCATCACCCGCTGGTGGGAGGA CCTAGAGAGGGACTTCCCTTGCCCTGTCTGTCGAAAGACATCCCGCTACCGCAGCCTCCG GCCTAATCGACAGCTGGGCAGTATGGTGGAAATTGCCAAGCAGCTCCAAGCTGTCAAGCG GAAGATCCGAGATGAGAGCCTCTGCCCCCAGCACCACGAGGCCCTCAGCCTCTTCTGCTA TGAGGACCAGGAGGCTGTCTGTTTGATATGTGCAATTTCCCACACTCACCGGGCCCATAC CGTTGTGCCACTGGATGATGCCACCCAGGAGTACAAGGAAAAACTGCAGAAGTGCCTGGA GCCCCTGGAGCAGAAGCTGCAGGAGATCACCCGCTGCAAGTCCTCTGAGGAGAAGAAGCC TGGCGAACTCAAGAGGCTAGTGGAGAGTCGCCGACAGCAGATCCTAAAGGAATTTGAAGA GCTTCATCGGCGGCTGGATGAAGAGCAGCAGGTGTTGCTTTCACGACTGGAGGAGGAGGA ACAGGACATTCTTCAGCGCCTCCGAGAAAACGCTGCTCACCTTGGAGACAAGCGCCGGGA CCTGGCCCACTTGGCTGCGGAGGTGGAGGGCAAGTGCTTACAGTCGGGCTTCGAGATGCT TAAGGATGTCAAAAGTACCCTGGAAAAATGTGAGAAGGTGAAGACCATGGAGGTGACTTC AGTGTCAATAGAGCTGGAAAAGAACTTCAGCAATTTCCCCCGACAGTACTTTGCCCTAAG GAAAATCCTTAAACAGCTAATTGCGGATGTGACCCT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 136-518, gnl|bosTau2|chr15 (32313237-32313613) | |
| 136-518, gnl|canFam2|chr21 (29787563-29787832) | |
| 136-518, gnl|danRer3|chr22 (48260896-48261168) | |
| 136-518, gnl|dasNov1|scaffold_39459 (8569-8300) | |
| 136-518, gnl|echTel1|scaffold_58151 (2379-2648) | |
| 136-518, gnl|fr1|chrUn (306528942-306529316) | |
| 136-518, gnl|galGal2|chr16 (113322-113592) | |
| 136-518, gnl|hg17|chr11 (4367802-4368071) | |
| 136-518, gnl|Hg17|chr11 (4368183-4367807) | |
| 136-518, gnl|loxAfr1|scaffold_9860 (8350-8616) | |
| 136-518, gnl|mm7|chr7 (98614021-98614290) | |
| 136-518, gnl|Mm7|chr7 (98614402-98614026) | |
| 136-518, gnl|monDom2|scaffold_42 (18790385-18790657) | |
| 136-518, gnl|oryCun1|scaffold_154621 (306-37) | |
| 136-518, gnl|panTro1|chr9 (4493549-4493818) | |
| 136-518, gnl|rheMac2|chr14 (69284536-69284267) | |
| 136-518, gnl|rn3|chr1 (160266253-160266522) | |
| 136-518, gnl|tetNig1|chr3 (10933576-10933289) | |
| 136-518, gnl|xenTro1|scaffold_428 (333772-334050) | |
| 612-845, gnl|bosTau2|chr23 (20961532-20961299) | |
| 612-845, gnl|Hg17|chr6 (30411499-30411732) | |
| 612-845, gnl|Mm7|chr17 (34412432-34412199) | |
| 868-983, gnl|bosTau2|chr23 (20959530-20959415) | |
| 868-983, gnl|canFam2|chr12 (3327812-3327934) | |
| 868-983, gnl|dasNov1|scaffold_141103 (4224-4342) | |
| 868-983, gnl|echTel1|scaffold_280332 (7816-7938) | |
| 868-983, gnl|galGal2|chr16 (95120-94998) | |
| 868-983, gnl|hg17|chr6 (30416260-30416382) | |
| 868-983, gnl|Hg17|chr6 (30416261-30416376) | |
| 868-983, gnl|loxAfr1|scaffold_29271 (8965-8843) | |
| 868-983, gnl|mm7|chr17 (34410080-34409958) | |
| 868-983, gnl|Mm7|chr17 (34410077-34409962) | |
| 868-983, gnl|monDom2|scaffold_42 (18784946-18784824) | |
| 868-983, gnl|oryCun1|scaffold_86899 (3707-3585) | |
| 868-983, gnl|panTro1|chr5 (30905037-30905159) | |
| 868-983, gnl|rheMac2|chr4 (29946766-29946888) | |
| 868-983, gnl|rn3|chr20 (2103296-2103418) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 136-518, gnl|bosTau2|chr15 (32313237-32313613) | |
| 136-518, gnl|canFam2|chr21 (29787563-29787832) | |
| 136-518, gnl|danRer3|chr22 (48260896-48261168) | |
| 136-518, gnl|dasNov1|scaffold_39459 (8569-8300) | |
| 136-518, gnl|echTel1|scaffold_58151 (2379-2648) | |
| 136-518, gnl|fr1|chrUn (306528942-306529316) | |
| 136-518, gnl|galGal2|chr16 (113322-113592) | |
| 136-518, gnl|hg17|chr11 (4367802-4368071) | |
| 136-518, gnl|Hg17|chr11 (4368183-4367807) | |
| 136-518, gnl|loxAfr1|scaffold_9860 (8350-8616) | |
| 136-518, gnl|mm7|chr7 (98614021-98614290) | |
| 136-518, gnl|Mm7|chr7 (98614402-98614026) | |
| 136-518, gnl|monDom2|scaffold_42 (18790385-18790657) | |
| 136-518, gnl|oryCun1|scaffold_154621 (306-37) | |
| 136-518, gnl|panTro1|chr9 (4493549-4493818) | |
| 136-518, gnl|rheMac2|chr14 (69284536-69284267) | |
| 136-518, gnl|rn3|chr1 (160266253-160266522) | |
| 136-518, gnl|tetNig1|chr3 (10933576-10933289) | |
| 136-518, gnl|xenTro1|scaffold_428 (333772-334050) | |
| 612-845, gnl|bosTau2|chr23 (20961532-20961299) | |
| 612-845, gnl|Hg17|chr6 (30411499-30411732) | |
| 612-845, gnl|Mm7|chr17 (34412432-34412199) | |
| 868-983, gnl|bosTau2|chr23 (20959530-20959415) | |
| 868-983, gnl|canFam2|chr12 (3327812-3327934) | |
| 868-983, gnl|dasNov1|scaffold_141103 (4224-4342) | |
| 868-983, gnl|echTel1|scaffold_280332 (7816-7938) | |
| 868-983, gnl|galGal2|chr16 (95120-94998) | |
| 868-983, gnl|hg17|chr6 (30416260-30416382) | |
| 868-983, gnl|Hg17|chr6 (30416261-30416376) | |
| 868-983, gnl|loxAfr1|scaffold_29271 (8965-8843) | |
| 868-983, gnl|mm7|chr17 (34410080-34409958) | |
| 868-983, gnl|Mm7|chr17 (34410077-34409962) | |
| 868-983, gnl|monDom2|scaffold_42 (18784946-18784824) | |
| 868-983, gnl|oryCun1|scaffold_86899 (3707-3585) | |
| 868-983, gnl|panTro1|chr5 (30905037-30905159) | |
| 868-983, gnl|rheMac2|chr4 (29946766-29946888) | |
| 868-983, gnl|rn3|chr20 (2103296-2103418) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eje (0.0988338) |