Ss1.1-reje10b_c2.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGAGATCGTGCAGGGGGTGCTGCAACAGGGCACGGCGTGGAGGATGAATGAGACGGCGGC CATAGTCTTCATGAAACAGATGGAAGACTGCTGCGACCCCGCCCATCTCTTTGCTATGAC TAAAATGAATTCCCCCATGGGGAATAGCATGTGGTACGATGGGGAGTTTTTATACTCATT CGCGGTTGACAATTCAACTTATTCCCTCTTTCCCCAGGCAACCCCATTCCAGCTGCCCTT GAAGAAATGCGCGGTGGTGGGAAATGGTGGGATTCTGAAGAAGAGTGGCTGTGGCCGTCA AATAGATGAAGCAAATTTTGTCATGCGATGCAATCTGCCTCCTTTGTCAAGTGAATATAC TAAGGATGTTGGATCCAAAAGTCATTTGGTGACGGCTAACCCCAGCATAATTCGGCAAAG GTTTCAGAACCTGCTGTGGTCCAGAAAGACGTTTGTGGACAACATGAAAATCTATAACCA CAGTTACATCTACATGCCTGCCTTTTCTATGAAGACGGGGACAGAGCCATCCCTCCGAGT TTATTATACACTGTCAGATGTTGGTGCCAATCAAACAGTGCTCTTTGCCAACCCCAACTT TCTGCGTAGCATTGGGAAGTTCTGGAAGAGTAGGGGAATTCATGCCAAGCGCCTGTCCAC AGGACTCTTTCTGGTGAGCGCAGCCCTGGGCCTCTGTGAAGAGGTGGCCATCTATGGCTT CTGGCCTTTCTCTGTGAATATGCATGAACAGCCTATAAGCCACCACTACTATGATAATGT CTTGCCCTTTTCTGGCTTCCATGCTATGCCGGAGGAATTTCTCCAACTCTGGTATCTTCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGAGATCGTGCAGGGGGTGCTGCAACAGGGCACGGCGTGGAGGATGAATGAGACGGCGGC CATAGTCTTCATGAAACAGATGGAAGACTGCTGCGACCCCGCCCATCTCTTTGCTATGAC TAAAATGAATTCCCCCATGGGGAATAGCATGTGGTACGATGGGGAGTTTTTATACTCATT CGCGGTTGACAATTCAACTTATTCCCTCTTTCCCCAGGCAACCCCATTCCAGCTGCCCTT GAAGAAATGCGCGGTGGTGGGAAATGGTGGGATTCTGAAGAAGAGTGGCTGTGGCCGTCA AATAGATGAAGCAAATTTTGTCATGCGATGCAATCTGCCTCCTTTGTCAAGTGAATATAC TAAGGATGTTGGATCCAAAAGTCATTTGGTGACGGCTAACCCCAGCATAATTCGGCAAAG GTTTCAGAACCTGCTGTGGTCCAGAAAGACGTTTGTGGACAACATGAAAATCTATAACCA CAGTTACATCTACATGCCTGCCTTTTCTATGAAGACGGGGACAGAGCCATCCCTCCGAGT TTATTATACACTGTCAGATGTTGGTGCCAATCAAACAGTGCTCTTTGCCAACCCCAACTT TCTGCGTAGCATTGGGAAGTTCTGGAAGAGTAGGGGAATTCATGCCAAGCGCCTGTCCAC AGGACTCTTTCTGGTGAGCGCAGCCCTGGGCCTCTGTGAAGAGGTGGCCATCTATGGCTT CTGGCCTTTCTCTGTGAATATGCATGAACAGCCTATAAGCCACCACTACTATGATAATGT CTTGCCCTTTTCTGGCTTCCATGCTATGCCGGAGGAATTTCTCCAACTCTGGTATCTTCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 73-218, gnl|bosTau2|chr5 (57112896-57112751) | |
| 73-218, gnl|Hg17|chr12 (22331494-22331349) | |
| 73-218, gnl|Mm7|chr6 (143005631-143005486) | |
| 419-840, gnl|bosTau2|chr5 (56951319-56950898) | |
| 419-840, gnl|canFam2|chr27 (28038445-28037972) | |
| 419-840, gnl|danRer3|chrNA (31597606-31597133) | |
| 419-840, gnl|dasNov1|scaffold_2194 (106802-107275) | |
| 419-840, gnl|echTel1|scaffold_320964 (61869-61399) | |
| 419-840, gnl|fr1|chrUn (76012142-76012600) | |
| 419-840, gnl|galGal2|chr1 (63309098-63308625) | |
| 419-840, gnl|hg17|chr12 (22245779-22246252) | |
| 419-840, gnl|Hg17|chr12 (22246241-22245820) | |
| 419-840, gnl|loxAfr1|scaffold_5259 (47526-47996) | |
| 419-840, gnl|mm7|chr6 (142920273-142920743) | |
| 419-840, gnl|Mm7|chr6 (142920735-142920314) | |
| 419-840, gnl|monDom2|scaffold_31 (3847636-3847153) | |
| 419-840, gnl|oryCun1|scaffold_206049 (134113-134586) | |
| 419-840, gnl|panTro1|chrUn_random (48627979-48628452) | |
| 419-840, gnl|rheMac2|chr11 (22524728-22525201) | |
| 419-840, gnl|rn3|chr4 (180967635-180968105) | |
| 419-840, gnl|tetNig1|chr19 (2471243-2470783) | |
| 419-840, gnl|xenTro1|scaffold_1427 (11890-11414) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 73-218, gnl|bosTau2|chr5 (57112896-57112751) | |
| 73-218, gnl|Hg17|chr12 (22331494-22331349) | |
| 73-218, gnl|Mm7|chr6 (143005631-143005486) | |
| 419-840, gnl|bosTau2|chr5 (56951319-56950898) | |
| 419-840, gnl|canFam2|chr27 (28038445-28037972) | |
| 419-840, gnl|danRer3|chrNA (31597606-31597133) | |
| 419-840, gnl|dasNov1|scaffold_2194 (106802-107275) | |
| 419-840, gnl|echTel1|scaffold_320964 (61869-61399) | |
| 419-840, gnl|fr1|chrUn (76012142-76012600) | |
| 419-840, gnl|galGal2|chr1 (63309098-63308625) | |
| 419-840, gnl|hg17|chr12 (22245779-22246252) | |
| 419-840, gnl|Hg17|chr12 (22246241-22245820) | |
| 419-840, gnl|loxAfr1|scaffold_5259 (47526-47996) | |
| 419-840, gnl|mm7|chr6 (142920273-142920743) | |
| 419-840, gnl|Mm7|chr6 (142920735-142920314) | |
| 419-840, gnl|monDom2|scaffold_31 (3847636-3847153) | |
| 419-840, gnl|oryCun1|scaffold_206049 (134113-134586) | |
| 419-840, gnl|panTro1|chrUn_random (48627979-48628452) | |
| 419-840, gnl|rheMac2|chr11 (22524728-22525201) | |
| 419-840, gnl|rn3|chr4 (180967635-180968105) | |
| 419-840, gnl|tetNig1|chr19 (2471243-2470783) | |
| 419-840, gnl|xenTro1|scaffold_1427 (11890-11414) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.10408) | |
| eje (0.0988338) |