Non-Coding RNA Search

Ss1.1-reje11b_p24.5

Sequence:


               
               GCTGCTGTTCGTGCTCTTCGGCCTCTTCGCCGTGGACTTCTCAGGCCTGGACGGGTGTAC
CCTGCGTCTGCGACCACGCTCAGGCCCCCTCAGCACCCCGCCAGCCTCCCCTGTGCCCCT
GCAGGTCTCACTGTGACCCGCCCAACAGCCGGGCAGCCTCTCACCTCCTGTTGCTGCCCT
CCGGTTACGCCCTGCCATCAGGGCCACCAGGAAGAGAGCCCAAGGCCAGTCAATCATCCC
TGATTGAGGATATTTATTATTATTATTATTAATTTTCTTTTTTGCCGCCGGTGGAATCAG
AGACACGGACGCAGGCAGGATCACGCGAAATCAGAATTCCTTCCGGAGAGCAAATCCGTA
CAGAAGGTCGTGGGGGGGGGAGGGAGAGGACCAGGGGAGGGGGGCCCAGGAAGGGGGGAG
TTGGGGACACAAGGACAGATGGCCCTGTCCGTCCGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTGCTGTTCGTGCTCTTCGGCCTCTTCGCCGTGGACTTCTCAGGCCTGGACGGGTGTAC
CCTGCGTCTGCGACCACGCTCAGGCCCCCTCAGCACCCCGCCAGCCTCCCCTGTGCCCCT
GCAGGTCTCACTGTGACCCGCCCAACAGCCGGGCAGCCTCTCACCTCCTGTTGCTGCCCT
CCGGTTACGCCCTGCCATCAGGGCCACCAGGAAGAGAGCCCAAGGCCAGTCAATCATCCC
TGATTGAGGATATTTATTATTATTATTATTAATTTTCTTTTTTGCCGCCGGTGGAATCAG
AGACACGGACGCAGGCAGGATCACGCGAAATCAGAATTCCTTCCGGAGAGCAAATCCGTA
CAGAAGGTCGTGGGGGGGGGAGGGAGAGGACCAGGGGAGGGGGGCCCAGGAAGGGGGGAG
TTGGGGACACAAGGACAGATGGCCCTGTCCGTCCGG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-456, gnl|bosTau2|chr18 (54942227-54942699)
               

               
               1-456, gnl|Hg17|chr19 (60516171-60515551)
               

               
               1-456, gnl|Mm7|chr7 (4290000-4289430)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-456, gnl|bosTau2|chr18 (54942227-54942699)
               

               
               1-456, gnl|Hg17|chr19 (60516171-60515551)
               

               
               1-456, gnl|Mm7|chr7 (4290000-4289430)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               fce (0.271592)
               

               
               eru (0.120048)
               

               
               eje (0.0988338)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.271592)
               

               
               eru (0.120048)
               

               
               eje (0.0988338)

	1-456, gnl\|bosTau2\|chr18 (54942227-54942699)
	1-456, gnl\|Hg17\|chr19 (60516171-60515551)
	1-456, gnl\|Mm7\|chr7 (4290000-4289430)