Ss1.1-reje13b_m19.5
Sequence: | Distiller database | More info |
Sequence: | Distiller database | Help | Less info |
TTGCTACCACTGAGCCACAGAGAGAACGCTAAAATTTTTTCTATAGTTACATTATTCGAG TCTTTCACTTTTCTCTGTGCTAGCAAGTCATGTCTGGATATTGATTTGGTTGAATCAAGG TGGGTTAGAAAATAGCTTTGCACACCTGATGTGTAAGATTTATCGTGAGATTAAATATCT TGGGTGAGTCTGACTTCTCTGTGTATCTTTTTTCCCTTGAGAATATTGTATCTTAATGTA GTTCATAGGTGCTTAAATGATCCCTTTTCCTGAGAAGCAAGCCTTCCCTTCAGCTTTCCA CAATAGTTTTTGTAAATGTTTTAGTTGAGAGCTGAATGCTGTACAGTCGAGGGCAATTTT AAAAATATATAGTATATATGTATATGGAAAAACTTTAAAGATGCTTTTAATTTATTTAAT GACTGTTGCCTTCCTATAATGGTAATAATTTTCATACTTAGATGGTGAGAAAAAAAGTCA TTTTACTAAGGTCATTACTGTGCAAAATGACACTCGGTTCTTTAGGACACTCCCTCAGGG GCGTACTGCAGTGAGACTGTGAAGGACGCCTCCCTGCCGACGTGTAAGCTTTGCTGCCTT TGTATACGGCCCTCCAGGAATGGGGAGCTTGTCGCAATACAGTTTGGAAATAAAATTGCT TCACTGAACTCTTAAAAAAAAACCTCGTGCCGAATTCGGCACGAGGAGTAAGGGGCATTC CTGTTACAGACCAAGGAGGACTGGAGAAAGAAAGCGCAAATCAGTTCGGGGTTGCATTGT GGATGCCAATCTAAGTGTTCTCAATTTGGTCATCGTAAAAAAAGGGGAGAAGGATATTCC |
Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
TTGCTACCACTGAGCCACAGAGAGAACGCTAAAATTTTTTCTATAGTTACATTATTCGAG TCTTTCACTTTTCTCTGTGCTAGCAAGTCATGTCTGGATATTGATTTGGTTGAATCAAGG TGGGTTAGAAAATAGCTTTGCACACCTGATGTGTAAGATTTATCGTGAGATTAAATATCT TGGGTGAGTCTGACTTCTCTGTGTATCTTTTTTCCCTTGAGAATATTGTATCTTAATGTA GTTCATAGGTGCTTAAATGATCCCTTTTCCTGAGAAGCAAGCCTTCCCTTCAGCTTTCCA CAATAGTTTTTGTAAATGTTTTAGTTGAGAGCTGAATGCTGTACAGTCGAGGGCAATTTT AAAAATATATAGTATATATGTATATGGAAAAACTTTAAAGATGCTTTTAATTTATTTAAT GACTGTTGCCTTCCTATAATGGTAATAATTTTCATACTTAGATGGTGAGAAAAAAAGTCA TTTTACTAAGGTCATTACTGTGCAAAATGACACTCGGTTCTTTAGGACACTCCCTCAGGG GCGTACTGCAGTGAGACTGTGAAGGACGCCTCCCTGCCGACGTGTAAGCTTTGCTGCCTT TGTATACGGCCCTCCAGGAATGGGGAGCTTGTCGCAATACAGTTTGGAAATAAAATTGCT TCACTGAACTCTTAAAAAAAAACCTCGTGCCGAATTCGGCACGAGGAGTAAGGGGCATTC CTGTTACAGACCAAGGAGGACTGGAGAAAGAAAGCGCAAATCAGTTCGGGGTTGCATTGT GGATGCCAATCTAAGTGTTCTCAATTTGGTCATCGTAAAAAAAGGGGAGAAGGATATTCC |
Coded protein: 1 entry(ies) | More info |
Aligned organism(s): 22 entry(ies) | More info |
Aligned organism(s): 22 entry(ies) | Help | Less info |
35-673, gnl|bosTau2|chr6 (53225265-53225916) | |
35-673, gnl|Hg17|chr4 (82335204-82335864) | |
35-673, gnl|Mm7|chr5 (98098214-98098834) | |
706-840, gnl|bosTau2|chr11 (69257414-69257548) | |
706-840, gnl|canFam2|chr20 (54305783-54305993) | |
706-840, gnl|danRer3|chrUn (148004291-148004081) | |
706-840, gnl|dasNov1|scaffold_104827 (3073-2863) | |
706-840, gnl|echTel1|scaffold_240249 (2810-3020) | |
706-840, gnl|fr1|chrUn (231447480-231447270) | |
706-840, gnl|galGal2|chrZ (13539213-13539421) | |
706-840, gnl|hg17|chr11 (101671135-101671345) | |
706-840, gnl|Hg17|chr11 (101671228-101671362) | |
706-840, gnl|loxAfr1|scaffold_18707 (8495-8285) | |
706-840, gnl|Mm7|chr17 (72777859-72777993) | |
706-840, gnl|mm7|chrX (65000700-65000490) | |
706-840, gnl|monDom2|scaffold_83 (5868060-5868270) | |
706-840, gnl|oryCun1|scaffold_24454 (4152-4362) | |
706-840, gnl|panTro1|chr9 (103646231-103646441) | |
706-840, gnl|rheMac2|chr14 (100882748-100882959) | |
706-840, gnl|rn3|chr17 (57927959-57928169) | |
706-840, gnl|tetNig1|chr18 (2518486-2518696) | |
706-840, gnl|xenTro1|scaffold_28 (322649-322859) |
Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
35-673, gnl|bosTau2|chr6 (53225265-53225916) | |
35-673, gnl|Hg17|chr4 (82335204-82335864) | |
35-673, gnl|Mm7|chr5 (98098214-98098834) | |
706-840, gnl|bosTau2|chr11 (69257414-69257548) | |
706-840, gnl|canFam2|chr20 (54305783-54305993) | |
706-840, gnl|danRer3|chrUn (148004291-148004081) | |
706-840, gnl|dasNov1|scaffold_104827 (3073-2863) | |
706-840, gnl|echTel1|scaffold_240249 (2810-3020) | |
706-840, gnl|fr1|chrUn (231447480-231447270) | |
706-840, gnl|galGal2|chrZ (13539213-13539421) | |
706-840, gnl|hg17|chr11 (101671135-101671345) | |
706-840, gnl|Hg17|chr11 (101671228-101671362) | |
706-840, gnl|loxAfr1|scaffold_18707 (8495-8285) | |
706-840, gnl|Mm7|chr17 (72777859-72777993) | |
706-840, gnl|mm7|chrX (65000700-65000490) | |
706-840, gnl|monDom2|scaffold_83 (5868060-5868270) | |
706-840, gnl|oryCun1|scaffold_24454 (4152-4362) | |
706-840, gnl|panTro1|chr9 (103646231-103646441) | |
706-840, gnl|rheMac2|chr14 (100882748-100882959) | |
706-840, gnl|rn3|chr17 (57927959-57928169) | |
706-840, gnl|tetNig1|chr18 (2518486-2518696) | |
706-840, gnl|xenTro1|scaffold_28 (322649-322859) |
Expressed library(ies): 2 entry(ies) | More info |
Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
gul (0.177588) | |
eje (0.0988338) |