Non-Coding RNA Search

Ss1.1-reje16b_m4.5

Sequence:


               
               CTCAGCCAGAGGCTCCAGGTATCCTGACCTGGAGCGGAAGCACCAAATGTGGCCTGACCC
ATGAAGGGCAATGAGAAGCGCAGCCCTTTCTCCCGGGCTGTGGCGGGGGGTGGGGGTGGG
GGCATGGAGAGGGGGATGGGTAAGGAGGCATGAATTTTGCTTTCAACTCCAGGAACAAAA
AGGTAAACCCCTTGTCCCACTCTCTCAGAAGCCCCCGTTTCTGCCAAATGCCATCCCGCT
GTCTGCAAGGTGGCAAATCGAAGCTGCAGTGTTGGCTCCTGTGCTTGGTGACGCTGTGAG
AGCCTTTCCACTAAAATGCCTCCAATGGCTCTTTCACGGGTAGCCTGTTAAACCATTTTA
ATACATTTTTAAACCCTCATAAAACTCTAGCACACTCCTCGCTTTCGCAGTTGGCAGACC
CAAAGCGAGCCTGAGTTGACTATAAAGGATATTGTATTCTGTTGAGGGGGATTTGTTTTT
ACCATTTCCTTTAATTATCAGTTTTACCAGAACACTTAGCTATGTTGACATGAGGCATCC
TTCCAGGTGATTCTCTTTTCTTAAATATTATGTAAACTGTGCCAACACAGACAAGGCATA
ATCAGTATAATCTCAACTATTGTTACTTTCACCTTCTGCGTATTAAACATGGTGTCAGCT
TTGTACACTGCAAATAAAAGGAATTCAACATGAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCAGCCAGAGGCTCCAGGTATCCTGACCTGGAGCGGAAGCACCAAATGTGGCCTGACCC
ATGAAGGGCAATGAGAAGCGCAGCCCTTTCTCCCGGGCTGTGGCGGGGGGTGGGGGTGGG
GGCATGGAGAGGGGGATGGGTAAGGAGGCATGAATTTTGCTTTCAACTCCAGGAACAAAA
AGGTAAACCCCTTGTCCCACTCTCTCAGAAGCCCCCGTTTCTGCCAAATGCCATCCCGCT
GTCTGCAAGGTGGCAAATCGAAGCTGCAGTGTTGGCTCCTGTGCTTGGTGACGCTGTGAG
AGCCTTTCCACTAAAATGCCTCCAATGGCTCTTTCACGGGTAGCCTGTTAAACCATTTTA
ATACATTTTTAAACCCTCATAAAACTCTAGCACACTCCTCGCTTTCGCAGTTGGCAGACC
CAAAGCGAGCCTGAGTTGACTATAAAGGATATTGTATTCTGTTGAGGGGGATTTGTTTTT
ACCATTTCCTTTAATTATCAGTTTTACCAGAACACTTAGCTATGTTGACATGAGGCATCC
TTCCAGGTGATTCTCTTTTCTTAAATATTATGTAAACTGTGCCAACACAGACAAGGCATA
ATCAGTATAATCTCAACTATTGTTACTTTCACCTTCTGCGTATTAAACATGGTGTCAGCT
TTGTACACTGCAAATAAAAGGAATTCAACATGAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               113-694, gnl|bosTau2|chrX (17675588-17675008)
               

               
               113-694, gnl|Hg17|chrX (107205573-107204989)
               

               
               113-694, gnl|Mm7|chrX (135830288-135829720)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               113-694, gnl|bosTau2|chrX (17675588-17675008)
               

               
               113-694, gnl|Hg17|chrX (107205573-107204989)
               

               
               113-694, gnl|Mm7|chrX (135830288-135829720)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               fce (0.271592)
               

               
               med (0.116252)
               

               
               eje (0.0988338)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.271592)
               

               
               med (0.116252)
               

               
               eje (0.0988338)

	113-694, gnl\|bosTau2\|chrX (17675588-17675008)
	113-694, gnl\|Hg17\|chrX (107205573-107204989)
	113-694, gnl\|Mm7\|chrX (135830288-135829720)