Non-Coding RNA Search

Ss1.1-reje18b_m1.5

Sequence:


               
               ACTTATAACCAAAGGCAAATTAAAGGCATAATTTAGGTATTCTATCCTTGTTTAGAATTT
TGGGACTATAAACCTCTGTTTTAACATTTTCAGAAGTGTGTTAGCTTCTTTCATGCTGTT
AGGTTAGTATTGTACCAAATAATGAGCAAATAGCACCAGAGTTGTATAATCCCAGAGTAT
TAAGTAGTGTCTTGGTAGTTAGGAGATTCATCCTCCTGAGTATAAACTCAGATCTAAATC
TAGTAAGGAAGGTTTAGTGAATTTTATATAAGTGGGAGCCTATCATTTGATTCTTTTTCA
TGATAAAAATCTAGTGTGATGAGAAGAGAAATTTCACGTGAAGGATTTTAGCCATCAAAA
AGTACAATCACTTATGCACAAAACTATCTCCCAAGACTTGTCCCAGGTCCCTCGTATTGA
AAAATTAAGAGTGTGATGGAAGATAGCACGATCTTGTCAAATTGGACAGTTGGCAACAAA
CAAAAAATGAAATATGACTTTTCCTGTGAACTCTACCGAATGTCTACATATTCGGCTTTC
CCTGCTGGAGTTCCTGTCTCAGAAAGGAGTCTTGCTCGTGCTGGTTTTTATTACACTGGT
GTGAATGACAAGGTCAAATGCTTCTGTTGTGGCCTGATGCTGGATAACTGGAAACAAGGA
GACAACCCTATGGAAAAGCATAAACAGCTATATCCTAGCTGTAGCTTTGTTCAGAATCTA
GTTTCTGTCACTTGTCTGGAATCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTTATAACCAAAGGCAAATTAAAGGCATAATTTAGGTATTCTATCCTTGTTTAGAATTT
TGGGACTATAAACCTCTGTTTTAACATTTTCAGAAGTGTGTTAGCTTCTTTCATGCTGTT
AGGTTAGTATTGTACCAAATAATGAGCAAATAGCACCAGAGTTGTATAATCCCAGAGTAT
TAAGTAGTGTCTTGGTAGTTAGGAGATTCATCCTCCTGAGTATAAACTCAGATCTAAATC
TAGTAAGGAAGGTTTAGTGAATTTTATATAAGTGGGAGCCTATCATTTGATTCTTTTTCA
TGATAAAAATCTAGTGTGATGAGAAGAGAAATTTCACGTGAAGGATTTTAGCCATCAAAA
AGTACAATCACTTATGCACAAAACTATCTCCCAAGACTTGTCCCAGGTCCCTCGTATTGA
AAAATTAAGAGTGTGATGGAAGATAGCACGATCTTGTCAAATTGGACAGTTGGCAACAAA
CAAAAAATGAAATATGACTTTTCCTGTGAACTCTACCGAATGTCTACATATTCGGCTTTC
CCTGCTGGAGTTCCTGTCTCAGAAAGGAGTCTTGCTCGTGCTGGTTTTTATTACACTGGT
GTGAATGACAAGGTCAAATGCTTCTGTTGTGGCCTGATGCTGGATAACTGGAAACAAGGA
GACAACCCTATGGAAAAGCATAAACAGCTATATCCTAGCTGTAGCTTTGTTCAGAATCTA
GTTTCTGTCACTTGTCTGGAATCC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               294-744, gnl|bosTau2|chr26 (17927597-17927138)
               

               
               294-744, gnl|Hg17|chr11 (101725718-101726164)
               

               
               294-744, gnl|Mm7|chr9 (7858412-7857995)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               294-744, gnl|bosTau2|chr26 (17927597-17927138)
               

               
               294-744, gnl|Hg17|chr11 (101725718-101726164)
               

               
               294-744, gnl|Mm7|chr9 (7858412-7857995)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               jca (0.11396)
               

               
               eje (0.0988338)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               jca (0.11396)
               

               
               eje (0.0988338)

	294-744, gnl\|bosTau2\|chr26 (17927597-17927138)
	294-744, gnl\|Hg17\|chr11 (101725718-101726164)
	294-744, gnl\|Mm7\|chr9 (7858412-7857995)