Ss1.1-reje23b_c3.5
|
TCTGCTAACTACACATGTGTGGCCATGTCCAGCCTGGGCGTCATTGAGGCGGTGGCCCAG
ATCACTGTGAAATCTCTCCCTAAAGCCCCCGGGACTCCTGTGGTGACAGAAAACACAGCA
ACCAGCATCACCATCACGTGGGACTCGGGGAACCCAGACCCTGTGTCCTACTACGTCATC
GAATATAAATCCAAGAGCCAGGATGGGCCATATCAGATCAAAGAGGACATCACCACAACG
CGGTACAGCATCGGAGGCCTGAGCCCCAACTCGGAGTACGAGATCTGGGTGTCAGCCGTC
AACTCCATCGGCCAGGGTCCACCCAGCGAGTCCGTGGTCACCCGCACGGGCGAGCAGGCC
CCCGCCAGTGCA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TCTGCTAACTACACATGTGTGGCCATGTCCAGCCTGGGCGTCATTGAGGCGGTGGCCCAG
ATCACTGTGAAATCTCTCCCTAAAGCCCCCGGGACTCCTGTGGTGACAGAAAACACAGCA
ACCAGCATCACCATCACGTGGGACTCGGGGAACCCAGACCCTGTGTCCTACTACGTCATC
GAATATAAATCCAAGAGCCAGGATGGGCCATATCAGATCAAAGAGGACATCACCACAACG
CGGTACAGCATCGGAGGCCTGAGCCCCAACTCGGAGTACGAGATCTGGGTGTCAGCCGTC
AACTCCATCGGCCAGGGTCCACCCAGCGAGTCCGTGGTCACCCGCACGGGCGAGCAGGCC
CCCGCCAGTGCA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
74-371, gnl|bosTau2|chr7 (15510226-15510523) |
|
74-371, gnl|canFam2|chr20 (57587563-57587190) |
|
74-371, gnl|danRer3|chrUn (36439474-36439120) |
|
74-371, gnl|dasNov1|scaffold_72836 (2991-3361) |
|
74-371, gnl|echTel1|scaffold_308157 (8652-9017) |
|
74-371, gnl|fr1|chrUn (101499765-101500134) |
|
74-371, gnl|galGal2|chr28 (3974677-3974310) |
|
74-371, gnl|hg17|chr19 (5195144-5195520) |
|
74-371, gnl|Hg17|chr19 (5195493-5195196) |
|
74-371, gnl|loxAfr1|scaffold_29999 (14593-14220) |
|
74-371, gnl|mm7|chr17 (54594090-54594457) |
|
74-371, gnl|Mm7|chr17 (54594439-54594142) |
|
74-371, gnl|monDom2|scaffold_85 (2591709-2592081) |
|
74-371, gnl|oryCun1|scaffold_204114 (48824-48461) |
|
74-371, gnl|panTro1|chr20 (5528105-5528485) |
|
74-371, gnl|rheMac2|chr19 (5154897-5155273) |
|
74-371, gnl|rn3|chrUn (25339403-25339038) |
|
74-371, gnl|tetNig1|chr15 (4501319-4500943) |
|
74-371, gnl|xenTro1|scaffold_157 (559992-559639) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
74-371, gnl|bosTau2|chr7 (15510226-15510523) |
|
74-371, gnl|canFam2|chr20 (57587563-57587190) |
|
74-371, gnl|danRer3|chrUn (36439474-36439120) |
|
74-371, gnl|dasNov1|scaffold_72836 (2991-3361) |
|
74-371, gnl|echTel1|scaffold_308157 (8652-9017) |
|
74-371, gnl|fr1|chrUn (101499765-101500134) |
|
74-371, gnl|galGal2|chr28 (3974677-3974310) |
|
74-371, gnl|hg17|chr19 (5195144-5195520) |
|
74-371, gnl|Hg17|chr19 (5195493-5195196) |
|
74-371, gnl|loxAfr1|scaffold_29999 (14593-14220) |
|
74-371, gnl|mm7|chr17 (54594090-54594457) |
|
74-371, gnl|Mm7|chr17 (54594439-54594142) |
|
74-371, gnl|monDom2|scaffold_85 (2591709-2592081) |
|
74-371, gnl|oryCun1|scaffold_204114 (48824-48461) |
|
74-371, gnl|panTro1|chr20 (5528105-5528485) |
|
74-371, gnl|rheMac2|chr19 (5154897-5155273) |
|
74-371, gnl|rn3|chrUn (25339403-25339038) |
|
74-371, gnl|tetNig1|chr15 (4501319-4500943) |
|
74-371, gnl|xenTro1|scaffold_157 (559992-559639) |
