Non-Coding RNA Search

Ss1.1-reje25b_h4.5

Sequence:


               
               TTTTACTGAGCTCTTGCATGATTTATCTTGTGTTACCATCCTAAATAAATGTTTTATTAA
ACATAGAATAAACTGTCTTTTTTTTAATGAATCAGGCTTTGGGAACAGCCTGTGTTAGGA
TGGCTGTTTGGGATTTTCAGTTGGCAACAAAAGCTCTCCCTGGGGCTGCAAACGTTTGCT
CTCCACTTAATAATCTAAAACTTTTTGTAACTTTTGTAAGAATGGGAATTTCCCTCCTTA
TTTTGCTGTCATATCAATTTGCTGCATTTTTTTTTTTTGGATTTCTGTGAAAACCGTAGA
CTTGGTTTTTATGTGATGCCCCGTAAATGTTAAAGTGTTGAATACTAACAGTGTTTATTC
CAAGAAAGATGTAGTAGTTTTGCTTGCCGCATTAAAGTATCTTGTGGAGGAAGGGAGCTG
GATGGGGTTTATTTTGATCAGTGTGTCTCTTAGTAGCTTTCTAAATAGGTGGTGTCACTG
CATAGCTTAACCTGCTGTCTTCCTCGCTCTCATCTTGCTCTCCCTCTCCGCCCGGCCTCA
CACCTTTGCTTTTGGGTATCAGAGTGTCTTTCCAGCATCCCAGCCTTGGTTTAGTCTGTG
TTTTTATCCTCTTTGGAAGATGTCGATAGCGTGAAGGAAGGGTGACAAATCCTGTCCTAA
GGGGAGCAGATTCCTTGCTGCCCAAACTGGAGGTGGGTAGGGGGCTCACACCTGCTCTTG
TGCCTGTACATAACACGCAAGCTGGCATCGGTCCTTGGAGAGGACAGTGCACAGAGCACG
CCACCTGATGTACGAGGCGCCAGTGCCTCCGTCAGTCATTCTGCCCAAGTGAAAATAAAG
TGGACTCGGCCGTTGCCACCACCAGGATGACCTCCTCAGAGGTGCCCGAGGGGAGCGCGG
GACTGGGGCGGCGGCAGCCTCCCCGCACACGCTGGAAGCAGAGGCACTGTGTGATGCGCC
TCACGAAGCACTGTTTCAGAATTGCTCTCACTTCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTACTGAGCTCTTGCATGATTTATCTTGTGTTACCATCCTAAATAAATGTTTTATTAA
ACATAGAATAAACTGTCTTTTTTTTAATGAATCAGGCTTTGGGAACAGCCTGTGTTAGGA
TGGCTGTTTGGGATTTTCAGTTGGCAACAAAAGCTCTCCCTGGGGCTGCAAACGTTTGCT
CTCCACTTAATAATCTAAAACTTTTTGTAACTTTTGTAAGAATGGGAATTTCCCTCCTTA
TTTTGCTGTCATATCAATTTGCTGCATTTTTTTTTTTTGGATTTCTGTGAAAACCGTAGA
CTTGGTTTTTATGTGATGCCCCGTAAATGTTAAAGTGTTGAATACTAACAGTGTTTATTC
CAAGAAAGATGTAGTAGTTTTGCTTGCCGCATTAAAGTATCTTGTGGAGGAAGGGAGCTG
GATGGGGTTTATTTTGATCAGTGTGTCTCTTAGTAGCTTTCTAAATAGGTGGTGTCACTG
CATAGCTTAACCTGCTGTCTTCCTCGCTCTCATCTTGCTCTCCCTCTCCGCCCGGCCTCA
CACCTTTGCTTTTGGGTATCAGAGTGTCTTTCCAGCATCCCAGCCTTGGTTTAGTCTGTG
TTTTTATCCTCTTTGGAAGATGTCGATAGCGTGAAGGAAGGGTGACAAATCCTGTCCTAA
GGGGAGCAGATTCCTTGCTGCCCAAACTGGAGGTGGGTAGGGGGCTCACACCTGCTCTTG
TGCCTGTACATAACACGCAAGCTGGCATCGGTCCTTGGAGAGGACAGTGCACAGAGCACG
CCACCTGATGTACGAGGCGCCAGTGCCTCCGTCAGTCATTCTGCCCAAGTGAAAATAAAG
TGGACTCGGCCGTTGCCACCACCAGGATGACCTCCTCAGAGGTGCCCGAGGGGAGCGCGG
GACTGGGGCGGCGGCAGCCTCCCCGCACACGCTGGAAGCAGAGGCACTGTGTGATGCGCC
TCACGAAGCACTGTTTCAGAATTGCTCTCACTTCCT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-996, gnl|bosTau2|chr25 (33388922-33387953)
               

               
               1-996, gnl|Hg17|chr7 (6274956-6273984)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-996, gnl|bosTau2|chr25 (33388922-33387953)
               

               
               1-996, gnl|Hg17|chr7 (6274956-6273984)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

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               ece (0.229305)
               

               
               nca (0.136874)
               

               
               eje (0.0988338)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)
               

               
               nca (0.136874)
               

               
               eje (0.0988338)

	1-996, gnl\|bosTau2\|chr25 (33388922-33387953)
	1-996, gnl\|Hg17\|chr7 (6274956-6273984)