Ss1.1-reje25b_i14.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CACTTACCTGCCTCTACACTTGCACCTCCGCTTCTCTGTCTGCAGAGCGGACGCCGACTC TCTGGGTGACGAGAGACACTGGTGGGATTGTTATGGCCTACCCAGGATACGGAGGAGGGT TCGGAAATTTTAGCAATCCGATGCCAGGAATGCATATGCATGTGGGACAGCCAGTGCCAG GAGCAGGGCCAGCTGTGCCCCCTAGTGGATGCCCTGCCTATCCACCTTATTCGGACAGTT ATCCCCCAGCTGGAGACCCCATGTGGACATACTTCACTGCTGTTGCTGGCCAGGATGGTG AAGTGGATGCTGAAGAACTTCAGAAATGTTTAACACAGTCTGGAATTAGTGGGACTTATT CTCCTTTCAGCTTGGAAACCTGCAGAATTATGATTGCCATGTTGGATAGAGATTGCACAG GAAAAATGGGATTTAATGAATTCAAAGAACTTTTGGCAGTAATTAATGCCTGGAAGCAAA ACTTCATAAACATTGATCATGATAGAAGTGGCACAGTAGAGCATCATGAATTGAATCAAG CCATTGCTGCTATGGGTTATAGGCTGAGTCCTCAAACATTAACTGCTATTGTTAAACGTT ATAGCAAGAATGGCAGAATCTTCTTTGATGATTATGTTGCTTGCTGTGTGAAGCTTCGAG CATTGACAGATTTTTTTAGGAGAAGAGACCACTTGCAACAAGGGATGGTGAATTTCTCAT ATGATGATTTTTTACAGGGCACTATGACAATTTGAATGTCAAGAATTTGAAAACTAAAGA AATACTGTGAATTTTCTCTTGCTTGGAAGAAATGAACTGGACTACTTTGAATTTAAGCTT TTGAGGTTTTCCCATATTCCTGTTAAATCTCTTCTCTTTCCATGTGTTTCTACTTTAGCT CACATTGCAAAGCAATATAAAAGATGCTTTTTGTATTTGAGTAATGTTATAACTTTTAAT AATGTTATAATTTTTAATAATGTTATAACTTTAGTAATGTTATAACTTTACAGATATCTG CATAATAAATATTGGTACATGATT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CACTTACCTGCCTCTACACTTGCACCTCCGCTTCTCTGTCTGCAGAGCGGACGCCGACTC TCTGGGTGACGAGAGACACTGGTGGGATTGTTATGGCCTACCCAGGATACGGAGGAGGGT TCGGAAATTTTAGCAATCCGATGCCAGGAATGCATATGCATGTGGGACAGCCAGTGCCAG GAGCAGGGCCAGCTGTGCCCCCTAGTGGATGCCCTGCCTATCCACCTTATTCGGACAGTT ATCCCCCAGCTGGAGACCCCATGTGGACATACTTCACTGCTGTTGCTGGCCAGGATGGTG AAGTGGATGCTGAAGAACTTCAGAAATGTTTAACACAGTCTGGAATTAGTGGGACTTATT CTCCTTTCAGCTTGGAAACCTGCAGAATTATGATTGCCATGTTGGATAGAGATTGCACAG GAAAAATGGGATTTAATGAATTCAAAGAACTTTTGGCAGTAATTAATGCCTGGAAGCAAA ACTTCATAAACATTGATCATGATAGAAGTGGCACAGTAGAGCATCATGAATTGAATCAAG CCATTGCTGCTATGGGTTATAGGCTGAGTCCTCAAACATTAACTGCTATTGTTAAACGTT ATAGCAAGAATGGCAGAATCTTCTTTGATGATTATGTTGCTTGCTGTGTGAAGCTTCGAG CATTGACAGATTTTTTTAGGAGAAGAGACCACTTGCAACAAGGGATGGTGAATTTCTCAT ATGATGATTTTTTACAGGGCACTATGACAATTTGAATGTCAAGAATTTGAAAACTAAAGA AATACTGTGAATTTTCTCTTGCTTGGAAGAAATGAACTGGACTACTTTGAATTTAAGCTT TTGAGGTTTTCCCATATTCCTGTTAAATCTCTTCTCTTTCCATGTGTTTCTACTTTAGCT CACATTGCAAAGCAATATAAAAGATGCTTTTTGTATTTGAGTAATGTTATAACTTTTAAT AATGTTATAATTTTTAATAATGTTATAACTTTAGTAATGTTATAACTTTACAGATATCTG CATAATAAATATTGGTACATGATT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 408-557, gnl|bosTau2|chr2 (18538954-18538805) | |
| 408-557, gnl|canFam2|chr36 (10777644-10777801) | |
| 408-557, gnl|danRer3|chr6 (9712423-9712267) | |
| 408-557, gnl|dasNov1|scaffold_7564 (2690-2533) | |
| 408-557, gnl|echTel1|scaffold_313944 (52322-52165) | |
| 408-557, gnl|fr1|chrUn (19278603-19278446) | |
| 408-557, gnl|hg17|chr2 (163038772-163038929) | |
| 408-557, gnl|Hg17|chr2 (163038775-163038924) | |
| 408-557, gnl|loxAfr1|scaffold_215 (130722-130565) | |
| 408-557, gnl|mm7|chr2 (62616823-62616980) | |
| 408-557, gnl|Mm7|chr2 (62616826-62616975) | |
| 408-557, gnl|monDom2|scaffold_2 (57113404-57113561) | |
| 408-557, gnl|oryCun1|scaffold_193257 (285-422) | |
| 408-557, gnl|panTro1|chr13 (52437824-52437983) | |
| 408-557, gnl|rheMac2|chr12 (25929405-25929562) | |
| 408-557, gnl|rn3|chr3 (44537355-44537512) | |
| 408-557, gnl|tetNig1|chr3 (3287200-3287044) | |
| 408-557, gnl|xenTro1|scaffold_576 (683118-682961) | |
| 712-974, gnl|bosTau2|chr2 (18534647-18534392) | |
| 712-974, gnl|Hg17|chr2 (163042216-163042473) | |
| 712-974, gnl|Mm7|chr2 (62622101-62622349) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 408-557, gnl|bosTau2|chr2 (18538954-18538805) | |
| 408-557, gnl|canFam2|chr36 (10777644-10777801) | |
| 408-557, gnl|danRer3|chr6 (9712423-9712267) | |
| 408-557, gnl|dasNov1|scaffold_7564 (2690-2533) | |
| 408-557, gnl|echTel1|scaffold_313944 (52322-52165) | |
| 408-557, gnl|fr1|chrUn (19278603-19278446) | |
| 408-557, gnl|hg17|chr2 (163038772-163038929) | |
| 408-557, gnl|Hg17|chr2 (163038775-163038924) | |
| 408-557, gnl|loxAfr1|scaffold_215 (130722-130565) | |
| 408-557, gnl|mm7|chr2 (62616823-62616980) | |
| 408-557, gnl|Mm7|chr2 (62616826-62616975) | |
| 408-557, gnl|monDom2|scaffold_2 (57113404-57113561) | |
| 408-557, gnl|oryCun1|scaffold_193257 (285-422) | |
| 408-557, gnl|panTro1|chr13 (52437824-52437983) | |
| 408-557, gnl|rheMac2|chr12 (25929405-25929562) | |
| 408-557, gnl|rn3|chr3 (44537355-44537512) | |
| 408-557, gnl|tetNig1|chr3 (3287200-3287044) | |
| 408-557, gnl|xenTro1|scaffold_576 (683118-682961) | |
| 712-974, gnl|bosTau2|chr2 (18534647-18534392) | |
| 712-974, gnl|Hg17|chr2 (163042216-163042473) | |
| 712-974, gnl|Mm7|chr2 (62622101-62622349) |
| Expressed library(ies): 8 entry(ies) | More info |
| Expressed library(ies): 8 entry(ies) | Help | Less info |
| pan (0.23596) | |
| gul (0.177588) | |
| nco (0.161734) | |
| lin (0.145603) | |
| thg (0.126791) | |
| eep (0.122564) | |
| med (0.116252) | |
| eje (0.0988338) |
| Expressed library(ies): 8 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pan (0.23596) | |
| gul (0.177588) | |
| nco (0.161734) | |
| lin (0.145603) | |
| thg (0.126791) | |
| eep (0.122564) | |
| med (0.116252) | |
| eje (0.0988338) |