Ss1.1-reje31b_i16.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCCAGCAAGACCTAACTCCAGCCTGGGACACTGCCCCTGCCCCTGTGGTGCCCAGGCACA CATCCTGACCATAGGCTTGGTGTGGGGTGTATGTGCTGAGCCCCTGGGGCCTGGGGGACT GAAACAAGGATCTTAGGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTT TGTGGTGTGGGTGAGGACTTTTTACGCCCTCTCCTGCAAGTCCCTCGCTGATGGCAACTT CGAAGTGGGGGTGCACATCGCTGACGTCAGCTACTTTGTTCCCGAGGGATCCAGCTTGGA TTCAGTGGCCGCTGAGAGAGCTACGAGCGTCTACTTGGTTCAGAAGGTGGTCCCCATGCT TCCCAGGCTGCTTTGTGAGGAGCTGTGCAGCCTCAATCCCATGACCGACAAGCTGACCTT CTCTGTGATCTGGACGCTAACTCCCAGAGGCAAGATCCTCAGCGAATGGTTTGGCCGGAC CGTCATCCGCTCCTGCACCAAACTGAGCTATGAACATGCACAGAGCATGATCGAAAGCCC GACTAGGAAAATCCCCGAGAAGGAGCTGCCCCCCATCTCCCCGGAGCACAGCGGCGAGGA GGTGCACCGCGCCGTCTTGACCCTCCACGGCATCGCCAAGGAGCTGCGCAAACAGCGGTT CGCAGACGGCGCCCTGCGTTTGGATCAGCTAAAGCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCCAGCAAGACCTAACTCCAGCCTGGGACACTGCCCCTGCCCCTGTGGTGCCCAGGCACA CATCCTGACCATAGGCTTGGTGTGGGGTGTATGTGCTGAGCCCCTGGGGCCTGGGGGACT GAAACAAGGATCTTAGGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTT TGTGGTGTGGGTGAGGACTTTTTACGCCCTCTCCTGCAAGTCCCTCGCTGATGGCAACTT CGAAGTGGGGGTGCACATCGCTGACGTCAGCTACTTTGTTCCCGAGGGATCCAGCTTGGA TTCAGTGGCCGCTGAGAGAGCTACGAGCGTCTACTTGGTTCAGAAGGTGGTCCCCATGCT TCCCAGGCTGCTTTGTGAGGAGCTGTGCAGCCTCAATCCCATGACCGACAAGCTGACCTT CTCTGTGATCTGGACGCTAACTCCCAGAGGCAAGATCCTCAGCGAATGGTTTGGCCGGAC CGTCATCCGCTCCTGCACCAAACTGAGCTATGAACATGCACAGAGCATGATCGAAAGCCC GACTAGGAAAATCCCCGAGAAGGAGCTGCCCCCCATCTCCCCGGAGCACAGCGGCGAGGA GGTGCACCGCGCCGTCTTGACCCTCCACGGCATCGCCAAGGAGCTGCGCAAACAGCGGTT CGCAGACGGCGCCCTGCGTTTGGATCAGCTAAAGCT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 1-193, gnl|bosTau2|chr3 (5772016-5772206) | |
| 1-193, gnl|Hg17|chr1 (156710156-156709937) | |
| 1-193, gnl|Mm7|chr1 (172468763-172468989) | |
| 233-348, gnl|bosTau2|chr2 (72280262-72280377) | |
| 233-348, gnl|canFam2|chr25 (46991316-46991477) | |
| 233-348, gnl|danRer3|chr2 (33674-33533) | |
| 233-348, gnl|dasNov1|scaffold_18732 (48807-48640) | |
| 233-348, gnl|echTel1|scaffold_299885 (59190-59030) | |
| 233-348, gnl|fr1|chrUn (32473148-32473300) | |
| 233-348, gnl|galGal2|chr9 (14856834-14856997) | |
| 233-348, gnl|hg17|chr2 (232928718-232928885) | |
| 233-348, gnl|Hg17|chr2 (232928747-232928862) | |
| 233-348, gnl|mm7|chr1 (86860389-86860556) | |
| 233-348, gnl|Mm7|chr1 (86860418-86860533) | |
| 233-348, gnl|monDom2|scaffold_167 (699635-699795) | |
| 233-348, gnl|oryCun1|scaffold_69597 (4713-4881) | |
| 233-348, gnl|panTro1|chr13 (123522408-123522575) | |
| 233-348, gnl|rheMac2|chr12 (96087757-96087924) | |
| 233-348, gnl|rn3|chr9 (85947788-85947955) | |
| 233-348, gnl|tetNig1|chr15 (2552521-2552403) | |
| 453-688, gnl|bosTau2|chr2 (72313309-72313544) | |
| 453-688, gnl|Hg17|chr2 (232953420-232953655) | |
| 453-688, gnl|Mm7|chr1 (86890766-86891001) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-193, gnl|bosTau2|chr3 (5772016-5772206) | |
| 1-193, gnl|Hg17|chr1 (156710156-156709937) | |
| 1-193, gnl|Mm7|chr1 (172468763-172468989) | |
| 233-348, gnl|bosTau2|chr2 (72280262-72280377) | |
| 233-348, gnl|canFam2|chr25 (46991316-46991477) | |
| 233-348, gnl|danRer3|chr2 (33674-33533) | |
| 233-348, gnl|dasNov1|scaffold_18732 (48807-48640) | |
| 233-348, gnl|echTel1|scaffold_299885 (59190-59030) | |
| 233-348, gnl|fr1|chrUn (32473148-32473300) | |
| 233-348, gnl|galGal2|chr9 (14856834-14856997) | |
| 233-348, gnl|hg17|chr2 (232928718-232928885) | |
| 233-348, gnl|Hg17|chr2 (232928747-232928862) | |
| 233-348, gnl|mm7|chr1 (86860389-86860556) | |
| 233-348, gnl|Mm7|chr1 (86860418-86860533) | |
| 233-348, gnl|monDom2|scaffold_167 (699635-699795) | |
| 233-348, gnl|oryCun1|scaffold_69597 (4713-4881) | |
| 233-348, gnl|panTro1|chr13 (123522408-123522575) | |
| 233-348, gnl|rheMac2|chr12 (96087757-96087924) | |
| 233-348, gnl|rn3|chr9 (85947788-85947955) | |
| 233-348, gnl|tetNig1|chr15 (2552521-2552403) | |
| 453-688, gnl|bosTau2|chr2 (72313309-72313544) | |
| 453-688, gnl|Hg17|chr2 (232953420-232953655) | |
| 453-688, gnl|Mm7|chr1 (86890766-86891001) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cty (0.10408) | |
| eje (0.0988338) |