Non-Coding RNA Search

Ss1.1-reje34b_j5.5

Sequence:


               
               CTAAAACAAACAGCAAGAAGCAGTTCTTGGCATGCTAGATACACAGTACTGACCTACCTC
CAGACCATGGTATTTTATAACCTCTTTATTTTCCTAAGCAATGAAGATGCAGTTAAAGAC
ATCAGGTGGCTGGTTATAAGTCTTTTGGAGGATGAACAACTAGAGGTTCGAGAGATGGCT
GCTACCACCTTAAGTGGTCTGTTACAGTGTAACTTCCTTACCATGGACAGTCCTATGCAG
ATTCATTTTGAGCAACTTTGCAAGACAAAACTACCGAAGAAAAGGAAGCGAGACCCTGGT
TTTGTAGGAGATACGATTCCTTCTGCAGAGTTGGTCAAACGTCATGCTGGGGTGCTGGGA
CTCGGTGCATGTGTTCTTTCTAGTCCTTATGATGTTCCCACTTGGATGCCCCAGCTCCTT
ATGAATCTTAGTGCACATCTGAATGATCCTCAGCCTATTGAGATGACTGTAAAAAAGACC
TTATCCAATTTCCGAAGGACGCACCATGACAATTGGCAAGAACACAAACAGCAATTCACT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTAAAACAAACAGCAAGAAGCAGTTCTTGGCATGCTAGATACACAGTACTGACCTACCTC
CAGACCATGGTATTTTATAACCTCTTTATTTTCCTAAGCAATGAAGATGCAGTTAAAGAC
ATCAGGTGGCTGGTTATAAGTCTTTTGGAGGATGAACAACTAGAGGTTCGAGAGATGGCT
GCTACCACCTTAAGTGGTCTGTTACAGTGTAACTTCCTTACCATGGACAGTCCTATGCAG
ATTCATTTTGAGCAACTTTGCAAGACAAAACTACCGAAGAAAAGGAAGCGAGACCCTGGT
TTTGTAGGAGATACGATTCCTTCTGCAGAGTTGGTCAAACGTCATGCTGGGGTGCTGGGA
CTCGGTGCATGTGTTCTTTCTAGTCCTTATGATGTTCCCACTTGGATGCCCCAGCTCCTT
ATGAATCTTAGTGCACATCTGAATGATCCTCAGCCTATTGAGATGACTGTAAAAAAGACC
TTATCCAATTTCCGAAGGACGCACCATGACAATTGGCAAGAACACAAACAGCAATTCACT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|13435418|gb|AAH04575.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|13435418|gb|AAH04575.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               138-328, gnl|bosTau2|chr11 (25671737-25671546)
               

               
               138-328, gnl|Hg17|chr2 (54008355-54008164)
               

               
               138-328, gnl|Mm7|chr11 (30826095-30826286)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               138-328, gnl|bosTau2|chr11 (25671737-25671546)
               

               
               138-328, gnl|Hg17|chr2 (54008355-54008164)
               

               
               138-328, gnl|Mm7|chr11 (30826095-30826286)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               tes (0.207814)
               

               
               pla (0.133672)
               

               
               eje (0.0988338)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)
               

               
               pla (0.133672)
               

               
               eje (0.0988338)

	138-328, gnl\|bosTau2\|chr11 (25671737-25671546)
	138-328, gnl\|Hg17\|chr2 (54008355-54008164)
	138-328, gnl\|Mm7\|chr11 (30826095-30826286)