Non-Coding RNA Search

Ss1.1-reje37b_e15.5

Sequence:


               
               AGTGAAAGCTCAGCTTTCCTAGTTAGGGGACTAAGGACAGACATCACCATGTTTTGTTTC
GTTTTGTTTTTTTTTTGTTTTTTTTTTTGCTCGTCAGATGAGAATGGGGGGGCAGTGCAT
AAGTTTAATGTAATGTCAGTACCACCTGCAGGTGGCATTCTTTGTAACTACTGAGTAGAT
TTCCAAGCGATATTCAAGGAACCAGCCCATCCCCACGTTGAAATTCACTGTACTGAAATT
TGACCTGCATGATTTTGAGCATTAAGTTGTGTTCTTCTCATTGCAGGTGTTGGCCGGGCT
TCATTTAAATATTTTCAATCAGCAGAAGAAGTGAAGCGTGCCATTGAGGCAGTGCTTTCA
GCCGACCCTCGGTCTGTGTATCGGCGGAAGCTCTGCCAGGATCGCCTTTTCTACTTCACA
GTAGACATAGCACACGTCACCTGCTGGTTTGGTGATGGTTTTGCAGAGGTACTAAAGATC
AAGCCAGCTTCTGAACCTGTTCAGATGAGTGACGCTGCAGAGTCCTTGGTGTCTCTGGGA
TCGTGAGTAGCCTCTGTCACGTCTTTAAAATGGATGAATTGAAGTTCCCATCGTGGTGCA
GCGGAAACGAATCTGACTAGGAACCATGAGGTTGGGGTTTGATCCCTGGCCTCGCTCAGT
GGGTTGAGGATCCAGCATTGCCATGAGCTGTGGTGTAGGTTGCAGATGTGGCTTGGATCC
TGTGTGGCTGTGGCTGTGGCATAGGCTGGCAGCTAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGTGAAAGCTCAGCTTTCCTAGTTAGGGGACTAAGGACAGACATCACCATGTTTTGTTTC
GTTTTGTTTTTTTTTTGTTTTTTTTTTTGCTCGTCAGATGAGAATGGGGGGGCAGTGCAT
AAGTTTAATGTAATGTCAGTACCACCTGCAGGTGGCATTCTTTGTAACTACTGAGTAGAT
TTCCAAGCGATATTCAAGGAACCAGCCCATCCCCACGTTGAAATTCACTGTACTGAAATT
TGACCTGCATGATTTTGAGCATTAAGTTGTGTTCTTCTCATTGCAGGTGTTGGCCGGGCT
TCATTTAAATATTTTCAATCAGCAGAAGAAGTGAAGCGTGCCATTGAGGCAGTGCTTTCA
GCCGACCCTCGGTCTGTGTATCGGCGGAAGCTCTGCCAGGATCGCCTTTTCTACTTCACA
GTAGACATAGCACACGTCACCTGCTGGTTTGGTGATGGTTTTGCAGAGGTACTAAAGATC
AAGCCAGCTTCTGAACCTGTTCAGATGAGTGACGCTGCAGAGTCCTTGGTGTCTCTGGGA
TCGTGAGTAGCCTCTGTCACGTCTTTAAAATGGATGAATTGAAGTTCCCATCGTGGTGCA
GCGGAAACGAATCTGACTAGGAACCATGAGGTTGGGGTTTGATCCCTGGCCTCGCTCAGT
GGGTTGAGGATCCAGCATTGCCATGAGCTGTGGTGTAGGTTGCAGATGTGGCTTGGATCC
TGTGTGGCTGTGGCTGTGGCATAGGCTGGCAGCTAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               264-554, gnl|bosTau2|chr8 (33116879-33116589)
               

               
               264-554, gnl|Hg17|chr9 (97746848-97746562)
               

               
               264-554, gnl|Mm7|chr4 (46394147-46393862)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               264-554, gnl|bosTau2|chr8 (33116879-33116589)
               

               
               264-554, gnl|Hg17|chr9 (97746848-97746562)
               

               
               264-554, gnl|Mm7|chr4 (46394147-46393862)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eje (0.0988338)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eje (0.0988338)

	264-554, gnl\|bosTau2\|chr8 (33116879-33116589)
	264-554, gnl\|Hg17\|chr9 (97746848-97746562)
	264-554, gnl\|Mm7\|chr4 (46394147-46393862)