Non-Coding RNA Search

Ss1.1-reje37b_p14.5

Sequence:


               
               ACATTCGGCAAGGACAGCGACACTGACAGGCCACTTTTCCCACCATTAACACCATGAAGC
TGCTTGCCATAGCTGTGCTGCTCTTCACTATCTGTAGCCTTGAAGGGGCTTTGGTTCGGA
GACAGGCAGAGGAGCCGTGTCTGCAGAGCCTGGTCTCTCAGTACCTCCAGACCGTGACTG
ACTTTGGCAAGGACCTGATAGAGAAGGCCAAGGGCTCAGAACTTCAAACTCAGGCCAAGA
CTTACTTTGAGAAGACACAGGAGCAGCTGACACCCTTGGTCAAGAAGGCTGGAACTGATA
TCTTTAACTTCTTGAGCAGTTTCATTGGCCTCAAAACTCAGCCTACTGCCCAGTGAGGTG
TCCAGACCACTGTCTTCCATCCCCAGCTGGCTCCTGGAACATCCGCTGGAAAGACCTAGA
GCTCCTCTCCCTACCCACTCCTTGTTTTCTACAATAAATATTGAAAGAGTCAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACATTCGGCAAGGACAGCGACACTGACAGGCCACTTTTCCCACCATTAACACCATGAAGC
TGCTTGCCATAGCTGTGCTGCTCTTCACTATCTGTAGCCTTGAAGGGGCTTTGGTTCGGA
GACAGGCAGAGGAGCCGTGTCTGCAGAGCCTGGTCTCTCAGTACCTCCAGACCGTGACTG
ACTTTGGCAAGGACCTGATAGAGAAGGCCAAGGGCTCAGAACTTCAAACTCAGGCCAAGA
CTTACTTTGAGAAGACACAGGAGCAGCTGACACCCTTGGTCAAGAAGGCTGGAACTGATA
TCTTTAACTTCTTGAGCAGTTTCATTGGCCTCAAAACTCAGCCTACTGCCCAGTGAGGTG
TCCAGACCACTGTCTTCCATCCCCAGCTGGCTCCTGGAACATCCGCTGGAAAGACCTAGA
GCTCCTCTCCCTACCCACTCCTTGTTTTCTACAATAAATATTGAAAGAGTCAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|38049|emb|CAA48420.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|38049|emb|CAA48420.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               234-473, gnl|bosTau2|chr3 (7580038-7580277)
               

               
               234-473, gnl|Hg17|chr1 (158005390-158005155)
               

               
               234-473, gnl|Mm7|chr1 (171196231-171196465)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               234-473, gnl|bosTau2|chr3 (7580038-7580277)
               

               
               234-473, gnl|Hg17|chr1 (158005390-158005155)
               

               
               234-473, gnl|Mm7|chr1 (171196231-171196465)

Expressed library(ies): 7 entry(ies)

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Expressed library(ies): 7 entry(ies)

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               fli (1.62305)
               

               
               eje (1.38367)
               

               
               eli (1.36633)
               

               
               nje (1.32736)
               

               
               cli (1.22249)
               

               
               fty (0.17584)
               

               
               ese (0.126502)

Expressed library(ies): 7 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fli (1.62305)
               

               
               eje (1.38367)
               

               
               eli (1.36633)
               

               
               nje (1.32736)
               

               
               cli (1.22249)
               

               
               fty (0.17584)
               

               
               ese (0.126502)

	234-473, gnl\|bosTau2\|chr3 (7580038-7580277)
	234-473, gnl\|Hg17\|chr1 (158005390-158005155)
	234-473, gnl\|Mm7\|chr1 (171196231-171196465)

	fli (1.62305)
	eje (1.38367)
	eli (1.36633)
	nje (1.32736)
	cli (1.22249)
	fty (0.17584)
	ese (0.126502)