Non-Coding RNA Search

Ss1.1-reje38b_f14.5

Sequence:


               
               GTAAGACCACTGCTTCTGGAGAAGAGCCATGTGCAAGATTCCGAAGGGAGCAGCTGGAGG
CTTGCAGCTATAAAACTGTTCACACTGGAGTTTTGAAAGAAACAACAATACCATAAGCTC
TAATTGGGAATCCTAATCAGGAAAGGAATTCATGACGTCTCATAGGTTTTTCTGTGCTAC
GAATCATGTCACTTAGTGTAAAGGTAGAGATACTAGGAGGTTTTACTTCAGCCCTAAGTC
AGAAATGAATGCCAGATTCGCAGCTGGATGTAAACCCTCATCCCCACCCTGAAGTTTTCC
TCTTCTTTCCCATTCCCCCCAAACCCAAAGATCAGACTACTATTCAATTTTACCATATGA
TCGGATTTTTTGAAGATGGGAGGCAAACGGAGTGATTTGCATCAATGGAATTGCACTGAC
AGTGTTTCTTAATAGGATTACTAAAATTTTTAATATAAAATGAAGATTTTTTTTTAAAAA
ATCAGGAGTTGATATTAGGTACTAGGACATTAGTTCAGATGATTTCATTTTTATTTCTAC
AGTGTTAAAAGTGCACTTATATGCTGGTTTATTTCCATCTTGGGAAAAAGAGACTACAAA
TTGAAGGGAAGATTATTACTTTTGCTTTAAAAAAAAAAGGAGTAGGGCAGATTTTATGAC
TTATTTTTGTTTAAGATATTATAAACTAGGTTAGACCCTTTGAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTAAGACCACTGCTTCTGGAGAAGAGCCATGTGCAAGATTCCGAAGGGAGCAGCTGGAGG
CTTGCAGCTATAAAACTGTTCACACTGGAGTTTTGAAAGAAACAACAATACCATAAGCTC
TAATTGGGAATCCTAATCAGGAAAGGAATTCATGACGTCTCATAGGTTTTTCTGTGCTAC
GAATCATGTCACTTAGTGTAAAGGTAGAGATACTAGGAGGTTTTACTTCAGCCCTAAGTC
AGAAATGAATGCCAGATTCGCAGCTGGATGTAAACCCTCATCCCCACCCTGAAGTTTTCC
TCTTCTTTCCCATTCCCCCCAAACCCAAAGATCAGACTACTATTCAATTTTACCATATGA
TCGGATTTTTTGAAGATGGGAGGCAAACGGAGTGATTTGCATCAATGGAATTGCACTGAC
AGTGTTTCTTAATAGGATTACTAAAATTTTTAATATAAAATGAAGATTTTTTTTTAAAAA
ATCAGGAGTTGATATTAGGTACTAGGACATTAGTTCAGATGATTTCATTTTTATTTCTAC
AGTGTTAAAAGTGCACTTATATGCTGGTTTATTTCCATCTTGGGAAAAAGAGACTACAAA
TTGAAGGGAAGATTATTACTTTTGCTTTAAAAAAAAAAGGAGTAGGGCAGATTTTATGAC
TTATTTTTGTTTAAGATATTATAAACTAGGTTAGACCCTTTGAAAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               35-708, gnl|bosTau2|chr4 (22662858-22663526)
               

               
               35-708, gnl|Hg17|chr7 (104841057-104840381)
               

               
               35-708, gnl|Mm7|chr12 (31218273-31218893)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               35-708, gnl|bosTau2|chr4 (22662858-22663526)
               

               
               35-708, gnl|Hg17|chr7 (104841057-104840381)
               

               
               35-708, gnl|Mm7|chr12 (31218273-31218893)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               cty (0.10408)
               

               
               eje (0.0988338)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)
               

               
               eje (0.0988338)

	35-708, gnl\|bosTau2\|chr4 (22662858-22663526)
	35-708, gnl\|Hg17\|chr7 (104841057-104840381)
	35-708, gnl\|Mm7\|chr12 (31218273-31218893)