Non-Coding RNA Search

Ss1.1-reli1128b_c3.5

Sequence:


               
               AAAGGGAGCGCTTGGTCCCGAGAGGGGTAGCTGGGCCTTGTTTCTCGCCCCACTTGAGGA
AGAAATATGGAGAAGTGCCGATTCCCCTTGACCTCCTCCGCGCTGTCCCATGATAATGAC
GCCTCCAGAGAGAAGGATAATCTGGGTCCCTCACTCTTCCTGCCCTTGCCCCAGCAAAGT
CTTCTTTATGTCACACTCACACCCTATTCCGGGTGACTGGAGCCCAAATCCGGCAACAAC
CATCCCTAATCCCAGGTCGTTTTGGTAATTCCCAAACCCAGATGTTGTGGCAACATTCAA
AGTGGGAGGAGTTTAGGCGGTGACCCGTCAGGTACCTGAGGTTCAACAAGCTACCCTTTT
CCTTTTTTCAGATAATGCTCGGAATCTTTTTCAATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAGGGAGCGCTTGGTCCCGAGAGGGGTAGCTGGGCCTTGTTTCTCGCCCCACTTGAGGA
AGAAATATGGAGAAGTGCCGATTCCCCTTGACCTCCTCCGCGCTGTCCCATGATAATGAC
GCCTCCAGAGAGAAGGATAATCTGGGTCCCTCACTCTTCCTGCCCTTGCCCCAGCAAAGT
CTTCTTTATGTCACACTCACACCCTATTCCGGGTGACTGGAGCCCAAATCCGGCAACAAC
CATCCCTAATCCCAGGTCGTTTTGGTAATTCCCAAACCCAGATGTTGTGGCAACATTCAA
AGTGGGAGGAGTTTAGGCGGTGACCCGTCAGGTACCTGAGGTTCAACAAGCTACCCTTTT
CCTTTTTTCAGATAATGCTCGGAATCTTTTTCAATG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-396, gnl|bosTau2|chr19 (14657829-14658249)
               

               
               3-396, gnl|Hg17|chr17 (6857315-6857733)
               

               
               3-396, gnl|Mm7|chr11 (70320942-70320564)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-396, gnl|bosTau2|chr19 (14657829-14658249)
               

               
               3-396, gnl|Hg17|chr17 (6857315-6857733)
               

               
               3-396, gnl|Mm7|chr11 (70320942-70320564)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               ece (0.229305)
               

               
               eli (0.151814)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ece (0.229305)
               

               
               eli (0.151814)

	3-396, gnl\|bosTau2\|chr19 (14657829-14658249)
	3-396, gnl\|Hg17\|chr17 (6857315-6857733)
	3-396, gnl\|Mm7\|chr11 (70320942-70320564)