Non-Coding RNA Search

Ss1.1-relu1303b_m17.5

Sequence:


               
               GAGAATAATCAGAGTTATCAGCTCAGTGGTTCATGTCTCTTCTAAAGCTCCTTAAGAAGG
------------------------------------------------------------
------------------------------------------------------------
------------------------TTCCCAGGGGGAAAAAGCAGTGCAAATAAATGAGGA
TCACACAATCATCGCCACCAGCTCAGGGCCTCTCTGGGGTTGGATTTAGTGATGCATCTC
CTTGGACTCATGCGGCATGGAGAAGCTTGAACTGAGATTCTTGGAAAAGGCAGAGAGGTC
AAGAGGAAGAAAGGAAATCCAGGAAGAAGAGACTCCAAGGTTTCAATTGGAGACAAATTC
CATCTACACATTCTACAAAGAGCCCCTATAAGAACTGTTAAGACCCTGAGATGCTCGTGT
GTCCGTGATCTGGCCTCAAATAAGAAGAAGTTCTTTCTGGTTCTGGACCAGCACACCCAC
CCTGATGCTGAGGAGCATAAGAGCAAGTTTAGAGGTCAGTGATGGAGTATTCATTTTAGG
AAAGATAATGGAGACAATATCAAAACTGCAAATGGAGTACTGTATCAGAGTTTAAGTAGC
AACTTGATACAACACAACAGATGGAGCTAAAACTGATGTATGCAACCTAAAAACTGGCAT
TTCTCCAAATATAATCTTTAATTAATTAACACAGGAGAAAAGTTTCATTTTATTGTCTGA
CATATCAAAACAATTCAATAAAGTAAAAACAAGATGCCATTCATAATTCTAGTGCAACTT
GTGGAGCATTCAGACATTGAAATTGTCATTAATTACTAAGTTAGAGTAAGGCCTATTCAT
TAGAAGTCACAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGAATAATCAGAGTTATCAGCTCAGTGGTTCATGTCTCTTCTAAAGCTCCTTAAGAAGG
------------------------------------------------------------
------------------------------------------------------------
------------------------TTCCCAGGGGGAAAAAGCAGTGCAAATAAATGAGGA
TCACACAATCATCGCCACCAGCTCAGGGCCTCTCTGGGGTTGGATTTAGTGATGCATCTC
CTTGGACTCATGCGGCATGGAGAAGCTTGAACTGAGATTCTTGGAAAAGGCAGAGAGGTC
AAGAGGAAGAAAGGAAATCCAGGAAGAAGAGACTCCAAGGTTTCAATTGGAGACAAATTC
CATCTACACATTCTACAAAGAGCCCCTATAAGAACTGTTAAGACCCTGAGATGCTCGTGT
GTCCGTGATCTGGCCTCAAATAAGAAGAAGTTCTTTCTGGTTCTGGACCAGCACACCCAC
CCTGATGCTGAGGAGCATAAGAGCAAGTTTAGAGGTCAGTGATGGAGTATTCATTTTAGG
AAAGATAATGGAGACAATATCAAAACTGCAAATGGAGTACTGTATCAGAGTTTAAGTAGC
AACTTGATACAACACAACAGATGGAGCTAAAACTGATGTATGCAACCTAAAAACTGGCAT
TTCTCCAAATATAATCTTTAATTAATTAACACAGGAGAAAAGTTTCATTTTATTGTCTGA
CATATCAAAACAATTCAATAAAGTAAAAACAAGATGCCATTCATAATTCTAGTGCAACTT
GTGGAGCATTCAGACATTGAAATTGTCATTAATTACTAAGTTAGAGTAAGGCCTATTCAT
TAGAAGTCACAT

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               135-768, gnl|bosTau2|chr1 (55074479-55073842)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               135-768, gnl|bosTau2|chr1 (55074479-55073842)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

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               elu (0.385356)
               

               
               ret (0.128733)
               

               
               spc (0.113366)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               elu (0.385356)
               

               
               ret (0.128733)
               

               
               spc (0.113366)