Ss1.1-relu1306b_c7.5
|
GAACCACTTTCGTTGGCTATGTACGCTTATGGACTGGTCAGAGTCCACACAAGTTCACGG
TTTCTGGCGACGAACGAGATAAAGGCTGGTGGTGGGAGAACGTCATTGCTGCCCTTTTTC
AGAGACACTCACCAATCAGCTGGCTTATCCGCACCACCCTGAGTGAATCAGAAAGCTTCG
AAGCTGCTGTTTACAAATTGGCCAAGACGCCCCTTATCGCTGATGTTTATTACATCGTTG
GTGGCACGACCCCCCGGGAGGGAGTGGTCATCACAAGGAACAGACGTGGCCCAGCGGACA
TTTGGCCTCTAGATCCTTTAAACGGAGCGTGGTTCCGAGTTGAGACAAACTATGATCACT
GGAAGCCAGCGCCTAAGAAAGATGACCGCAGAACACCTGCCATCAAAGCCCTTAATGCCA
CAGGCCAAGCCAACCTCACCCTGGAGACGCTCTTCCAGGTAACTGTGTCATGGTGTCCAG
GTCTTACCCGGGATATTTGGTGCCTTGTCAACGGTGATTTTAAAAAGACTTCTCCCCTGA
AATCAAATGTGATAGATGAAAATG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GAACCACTTTCGTTGGCTATGTACGCTTATGGACTGGTCAGAGTCCACACAAGTTCACGG
TTTCTGGCGACGAACGAGATAAAGGCTGGTGGTGGGAGAACGTCATTGCTGCCCTTTTTC
AGAGACACTCACCAATCAGCTGGCTTATCCGCACCACCCTGAGTGAATCAGAAAGCTTCG
AAGCTGCTGTTTACAAATTGGCCAAGACGCCCCTTATCGCTGATGTTTATTACATCGTTG
GTGGCACGACCCCCCGGGAGGGAGTGGTCATCACAAGGAACAGACGTGGCCCAGCGGACA
TTTGGCCTCTAGATCCTTTAAACGGAGCGTGGTTCCGAGTTGAGACAAACTATGATCACT
GGAAGCCAGCGCCTAAGAAAGATGACCGCAGAACACCTGCCATCAAAGCCCTTAATGCCA
CAGGCCAAGCCAACCTCACCCTGGAGACGCTCTTCCAGGTAACTGTGTCATGGTGTCCAG
GTCTTACCCGGGATATTTGGTGCCTTGTCAACGGTGATTTTAAAAAGACTTCTCCCCTGA
AATCAAATGTGATAGATGAAAATG
|
|
gi|61865488|ref|XP_598996.1| |
Protein identifier
|
gi|61865488|ref|XP_598996.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
156-331, gnl|bosTau2|chr6 (50268704-50268879) |
|
156-331, gnl|canFam2|chr32 (3456268-3456455) |
|
156-331, gnl|echTel1|scaffold_10845 (1411-1598) |
|
156-331, gnl|fr1|chrUn (163359096-163359283) |
|
156-331, gnl|galGal2|chr4 (50517987-50518174) |
|
156-331, gnl|hg17|chr4 (77199275-77199462) |
|
156-331, gnl|Hg17|chr4 (77199455-77199280) |
|
156-331, gnl|loxAfr1|scaffold_129053 (347-522) |
|
156-331, gnl|mm7|chr5 (92250830-92251017) |
|
156-331, gnl|Mm7|chr5 (92251010-92250835) |
|
156-331, gnl|monDom2|scaffold_32 (20713066-20713266) |
|
156-331, gnl|oryCun1|scaffold_206477 (94885-94698) |
|
156-331, gnl|panTro1|chr3 (56527373-56527186) |
|
156-331, gnl|rheMac2|chr5 (53660277-53660090) |
|
156-331, gnl|rn3|chr14 (17353206-17353019) |
|
156-331, gnl|tetNig1|chr11 (9469938-9470125) |
|
156-331, gnl|xenTro1|scaffold_338 (236713-236900) |
| |
|
389-547, gnl|bosTau2|chr6 (50270342-50270497) |
|
389-547, gnl|Hg17|chr4 (77198310-77198145) |
|
389-547, gnl|Mm7|chr5 (92249825-92249694) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
156-331, gnl|bosTau2|chr6 (50268704-50268879) |
|
156-331, gnl|canFam2|chr32 (3456268-3456455) |
|
156-331, gnl|echTel1|scaffold_10845 (1411-1598) |
|
156-331, gnl|fr1|chrUn (163359096-163359283) |
|
156-331, gnl|galGal2|chr4 (50517987-50518174) |
|
156-331, gnl|hg17|chr4 (77199275-77199462) |
|
156-331, gnl|Hg17|chr4 (77199455-77199280) |
|
156-331, gnl|loxAfr1|scaffold_129053 (347-522) |
|
156-331, gnl|mm7|chr5 (92250830-92251017) |
|
156-331, gnl|Mm7|chr5 (92251010-92250835) |
|
156-331, gnl|monDom2|scaffold_32 (20713066-20713266) |
|
156-331, gnl|oryCun1|scaffold_206477 (94885-94698) |
|
156-331, gnl|panTro1|chr3 (56527373-56527186) |
|
156-331, gnl|rheMac2|chr5 (53660277-53660090) |
|
156-331, gnl|rn3|chr14 (17353206-17353019) |
|
156-331, gnl|tetNig1|chr11 (9469938-9470125) |
|
156-331, gnl|xenTro1|scaffold_338 (236713-236900) |
| |
|
389-547, gnl|bosTau2|chr6 (50270342-50270497) |
|
389-547, gnl|Hg17|chr4 (77198310-77198145) |
|
389-547, gnl|Mm7|chr5 (92249825-92249694) |
|
elu (0.385356) |
|
cly (0.120642) |
|
clu (0.119646) |
|
elu (0.385356) |
|
cly (0.120642) |
|
clu (0.119646) |
