Non-Coding RNA Search

Ss1.1-relu1306b_d2.5

Sequence:


               
               GGGGATGGGGCGGATCTTGATCTGGAGCGAGTGGGCTTGATTTCCTCTATTCTGGAAAGC
TCGAAGGCTGACAGGGCTCTCGGCTCTTGGCTGCCCGGCTTCTAAGGGCACCAAAGGGAC
CGTTTGTTTCTGAAGTCACTCCCACACCCATCTCCTTCCTGCACTCCTCTGCCACCAGGA
GTTTAATTACAGGCTGGAGAAGAAGGAAGGAAGAAACATCTCTTTGAAGGCAACGATGCT
TTGAAACCGGGACTGGCGATGAGTCATGACTGTTGAAAGTAGATGAAGGCTTGTCCTTTT
CCTCCCCTTTTTCTCTGACATGAACGTGGAGGTAGCGATGAGGGGGAGGAGGGTTGGCAA
GTTCAAGGGCAGGTGGTTTGAGGGAGGGAGTGCTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGGATGGGGCGGATCTTGATCTGGAGCGAGTGGGCTTGATTTCCTCTATTCTGGAAAGC
TCGAAGGCTGACAGGGCTCTCGGCTCTTGGCTGCCCGGCTTCTAAGGGCACCAAAGGGAC
CGTTTGTTTCTGAAGTCACTCCCACACCCATCTCCTTCCTGCACTCCTCTGCCACCAGGA
GTTTAATTACAGGCTGGAGAAGAAGGAAGGAAGAAACATCTCTTTGAAGGCAACGATGCT
TTGAAACCGGGACTGGCGATGAGTCATGACTGTTGAAAGTAGATGAAGGCTTGTCCTTTT
CCTCCCCTTTTTCTCTGACATGAACGTGGAGGTAGCGATGAGGGGGAGGAGGGTTGGCAA
GTTCAAGGGCAGGTGGTTTGAGGGAGGGAGTGCTCC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-396, gnl|bosTau2|chr16 (10942616-10942242)
               

               
               2-396, gnl|Hg17|chr1 (217258834-217259219)
               

               
               2-396, gnl|Mm7|chr1 (184399544-184399167)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-396, gnl|bosTau2|chr16 (10942616-10942242)
               

               
               2-396, gnl|Hg17|chr1 (217258834-217259219)
               

               
               2-396, gnl|Mm7|chr1 (184399544-184399167)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               elu (0.385356)
               

               
               nje (0.16592)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               elu (0.385356)
               

               
               nje (0.16592)

	2-396, gnl\|bosTau2\|chr16 (10942616-10942242)
	2-396, gnl\|Hg17\|chr1 (217258834-217259219)
	2-396, gnl\|Mm7\|chr1 (184399544-184399167)