Non-Coding RNA Search

Ss1.1-relu1317b_o8.5

Sequence:


               
               GTTAAGGATCAGTGTTGCCGTGAGCTGTGGTGTAGGTCGCAGATGCAGCTCAGATCCTGT
GTTGCTGTGGCTATGGTGTAGGCCGGCGATTCAGCTCCGATTCAACCCTTAGCCTGGGAA
CCTCCATATGCTGCGGGTGCGGCCCTAAAAAGCTAAATAAATAAATCAGTAAATAAAAGT
TACCACTGTCATAGTAGAACCACCCTTCTTTATTTAAATTGGAAGCATCCTAGGCTTAGA
ATTTTGTGTTTCTGGAAGGTAGTTTATACCATGACTGTTTCATTATGCCCAAAAAACCTT
CTGCCAGTTGAAGTTATGTGAAGCTCAAGTGGCCTGAATTCTCTGCCCTTTTAACTTGCT
TTGCAAGCCTACCCTGAAAATAAATTAGTCAACTTATTCTCACAACATGTCCCAGTTGCC
TAGAAAGGATCACACAGAACATCTCACACACACTCACACACACACACACACACACACACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTAAGGATCAGTGTTGCCGTGAGCTGTGGTGTAGGTCGCAGATGCAGCTCAGATCCTGT
GTTGCTGTGGCTATGGTGTAGGCCGGCGATTCAGCTCCGATTCAACCCTTAGCCTGGGAA
CCTCCATATGCTGCGGGTGCGGCCCTAAAAAGCTAAATAAATAAATCAGTAAATAAAAGT
TACCACTGTCATAGTAGAACCACCCTTCTTTATTTAAATTGGAAGCATCCTAGGCTTAGA
ATTTTGTGTTTCTGGAAGGTAGTTTATACCATGACTGTTTCATTATGCCCAAAAAACCTT
CTGCCAGTTGAAGTTATGTGAAGCTCAAGTGGCCTGAATTCTCTGCCCTTTTAACTTGCT
TTGCAAGCCTACCCTGAAAATAAATTAGTCAACTTATTCTCACAACATGTCCCAGTTGCC
TAGAAAGGATCACACAGAACATCTCACACACACTCACACACACACACACACACACACACA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               150-464, gnl|bosTau2|chrX (1129505-1129812)
               

               
               150-464, gnl|Hg17|chrX (118369744-118370058)
               

               
               150-464, gnl|Mm7|chrX (31537666-31538205)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               150-464, gnl|bosTau2|chrX (1129505-1129812)
               

               
               150-464, gnl|Hg17|chrX (118369744-118370058)
               

               
               150-464, gnl|Mm7|chrX (31537666-31538205)

Expressed library(ies): 7 entry(ies)

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Expressed library(ies): 7 entry(ies)

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               elu (0.385356)
               

               
               cbe (0.239234)
               

               
               hea (0.204499)
               

               
               aor (0.195274)
               

               
               sin (0.174948)
               

               
               eye (0.170503)
               

               
               bla (0.124347)

Expressed library(ies): 7 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               elu (0.385356)
               

               
               cbe (0.239234)
               

               
               hea (0.204499)
               

               
               aor (0.195274)
               

               
               sin (0.174948)
               

               
               eye (0.170503)
               

               
               bla (0.124347)

	150-464, gnl\|bosTau2\|chrX (1129505-1129812)
	150-464, gnl\|Hg17\|chrX (118369744-118370058)
	150-464, gnl\|Mm7\|chrX (31537666-31538205)

	elu (0.385356)
	cbe (0.239234)
	hea (0.204499)
	aor (0.195274)
	sin (0.174948)
	eye (0.170503)
	bla (0.124347)