Non-Coding RNA Search

Ss1.1-relu1325c_e16.5

Sequence:


               
               CTGGTAGACCCCACACTTTTCCTTCTTTGCAATCTGATTTTGTCATGACTATCAGTGGGG
AAGCCCCAGTTTTATGTTCATTTGGCAAAAATAAATTTGAATGCTTCATGGTGGTTGATA
TGGAACTTTGACCTTAAAACACATGATTCAGATTCCTTAAAACTTGTTTGTTCATACCAA
AGGTCAGGCTCTGCAGATGTGTGTGTGGTGGGTGCATAGAACGGGGAGGTCTGGGGGGCC
TGGCCCTGTGCGCGTTACTAAGGGGGACACAGTGAGACAGTATGGGATTTAATTGAAAAC
ACATCACTTATGGGTCACACTACCAGTGTTGTCAGGTATTTGTTCTTAATTGTTATTGTA
GTATATTTTCCGGTGTTTTATTGTTCTAATTTAATACTTTCACCCTGTCGTCTGACTGTG
AACTGCTAACAGTGTTAAACTTGATGTAAATAAATGAGGCCCTTGAAAGGGGACTGCTCT
CTGCCTGTTGTCTCACAAGGCTTGCCAACTTGTGTTTTATTTTAAATAAAGGTTGCAATA
TTTTATTGGCAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGGTAGACCCCACACTTTTCCTTCTTTGCAATCTGATTTTGTCATGACTATCAGTGGGG
AAGCCCCAGTTTTATGTTCATTTGGCAAAAATAAATTTGAATGCTTCATGGTGGTTGATA
TGGAACTTTGACCTTAAAACACATGATTCAGATTCCTTAAAACTTGTTTGTTCATACCAA
AGGTCAGGCTCTGCAGATGTGTGTGTGGTGGGTGCATAGAACGGGGAGGTCTGGGGGGCC
TGGCCCTGTGCGCGTTACTAAGGGGGACACAGTGAGACAGTATGGGATTTAATTGAAAAC
ACATCACTTATGGGTCACACTACCAGTGTTGTCAGGTATTTGTTCTTAATTGTTATTGTA
GTATATTTTCCGGTGTTTTATTGTTCTAATTTAATACTTTCACCCTGTCGTCTGACTGTG
AACTGCTAACAGTGTTAAACTTGATGTAAATAAATGAGGCCCTTGAAAGGGGACTGCTCT
CTGCCTGTTGTCTCACAAGGCTTGCCAACTTGTGTTTTATTTTAAATAAAGGTTGCAATA
TTTTATTGGCAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-552, gnl|bosTau2|chr16 (42759160-42758612)
               

               
               3-552, gnl|Hg17|chr1 (175800658-175800123)
               

               
               3-552, gnl|Mm7|chr1 (156611694-156612221)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-552, gnl|bosTau2|chr16 (42759160-42758612)
               

               
               3-552, gnl|Hg17|chr1 (175800658-175800123)
               

               
               3-552, gnl|Mm7|chr1 (156611694-156612221)

Expressed library(ies): 8 entry(ies)

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Expressed library(ies): 8 entry(ies)

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               elu (0.385356)
               

               
               fcc (0.197785)
               

               
               ill (0.175593)
               

               
               bfe (0.149858)
               

               
               cst (0.140036)
               

               
               che (0.136314)
               

               
               pla (0.133672)
               

               
               ecc (0.115035)

Expressed library(ies): 8 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               elu (0.385356)
               

               
               fcc (0.197785)
               

               
               ill (0.175593)
               

               
               bfe (0.149858)
               

               
               cst (0.140036)
               

               
               che (0.136314)
               

               
               pla (0.133672)
               

               
               ecc (0.115035)

	3-552, gnl\|bosTau2\|chr16 (42759160-42758612)
	3-552, gnl\|Hg17\|chr1 (175800658-175800123)
	3-552, gnl\|Mm7\|chr1 (156611694-156612221)

	elu (0.385356)
	fcc (0.197785)
	ill (0.175593)
	bfe (0.149858)
	cst (0.140036)
	che (0.136314)
	pla (0.133672)
	ecc (0.115035)