Non-Coding RNA Search

Ss1.1-relu1325c_n20.5

Sequence:


               
               AGACGTCTGATGGATAAAATTGTGCCTAGTTGTTTTGTAGAGAAGAATGTCAAACTCTCA
TTCTTCTTGAATAGGCACTATTATTTGAATCTCTGGAGTTATTGCTAGCTCATTGCTTCA
AAATTAAGTTGAGGAATTCAAGAATAATTTATTTTAGCAAATCCTATTTAAGATATTTAA
GAATTTGAACTGCCAAAAATCTTTCCTCTCCACAGAGGTGGTTTCTTTAATATTTACACA
AAATGAATGACCTTCGGGTCTTATTGGAAATTCAGAGTAATACGGCCTTGCCTGGAATGG
CAGATTTCCTTAGTTTCAAAATTTTCATAAATGTCTTTGGCTCTTGCTTGTAACTCTTGA
CAGAGAGAAACCATTTACATTTTTTGGTACATAAGGCAAAGCTTTTTTCTTAATTATCCG
CACCAGGCAGGCTTAAGGGGAAACTGAGACATGGGCACTAGTTTAACCATAAAATACCAA
CCCCAAGTGCCCCTGTCCTGTACCTTTTCCCGCTCTACTCAGGCCCTGGGAAGACGTCCT
CAGTAAATATTTATGGAATAACTGAATGTTTTCAGGATTCTTACACTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGACGTCTGATGGATAAAATTGTGCCTAGTTGTTTTGTAGAGAAGAATGTCAAACTCTCA
TTCTTCTTGAATAGGCACTATTATTTGAATCTCTGGAGTTATTGCTAGCTCATTGCTTCA
AAATTAAGTTGAGGAATTCAAGAATAATTTATTTTAGCAAATCCTATTTAAGATATTTAA
GAATTTGAACTGCCAAAAATCTTTCCTCTCCACAGAGGTGGTTTCTTTAATATTTACACA
AAATGAATGACCTTCGGGTCTTATTGGAAATTCAGAGTAATACGGCCTTGCCTGGAATGG
CAGATTTCCTTAGTTTCAAAATTTTCATAAATGTCTTTGGCTCTTGCTTGTAACTCTTGA
CAGAGAGAAACCATTTACATTTTTTGGTACATAAGGCAAAGCTTTTTTCTTAATTATCCG
CACCAGGCAGGCTTAAGGGGAAACTGAGACATGGGCACTAGTTTAACCATAAAATACCAA
CCCCAAGTGCCCCTGTCCTGTACCTTTTCCCGCTCTACTCAGGCCCTGGGAAGACGTCCT
CAGTAAATATTTATGGAATAACTGAATGTTTTCAGGATTCTTACACTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-587, gnl|bosTau2|chr26 (27800406-27799829)
               

               
               1-587, gnl|Hg17|chr10 (124912506-124913088)
               

               
               1-587, gnl|Mm7|chr7 (127925611-127926177)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-587, gnl|bosTau2|chr26 (27800406-27799829)
               

               
               1-587, gnl|Hg17|chr10 (124912506-124913088)
               

               
               1-587, gnl|Mm7|chr7 (127925611-127926177)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               elu (0.385356)
               

               
               aor (0.195274)
               

               
               gul (0.177588)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               elu (0.385356)
               

               
               aor (0.195274)
               

               
               gul (0.177588)

	1-587, gnl\|bosTau2\|chr26 (27800406-27799829)
	1-587, gnl\|Hg17\|chr10 (124912506-124913088)
	1-587, gnl\|Mm7\|chr7 (127925611-127926177)