Non-Coding RNA Search

Ss1.1-relu1332c_e1.5

Sequence:


               
               CAGCTCTTGTTCGCCACCAGCGAATTCACACTGGAGAGAAGCCTTTGAATGTAATGGGAG
TGAGCAAAAGTTCGCTCAGAGTTACTGCTGAATTAAATATCGGCGAGTCTACCTGAAAGA
GAGCCACACATCTATCTTCCTCACTTCCTCTGAGTCTCAAGAGCTCCTGCCTTACCATAA
TAGGACGGACAACTTCAGGCGTGTCCCTTCCGACTCAGACCTTTGACCTTAGAGAATGGG
GCAGATTGGGCAGATCATCCTGGTGCAGTGATTAGTAACCTAGTCAGTTTCCCCAGCAAT
GACACCAGCCTTGAGAGATTAGGATGCAGGCGGCGGATTAACTGCCGGGAGTAGTGGGGA
GCTCGGGGACCAGTCTCCTTCCGCTTTGGAAGGGAGTTTGCACTAGACCATTTTTTCTCA
CACCAGAGGAGCCTTTCTTTCCAAGGTGGAGATGGAAGCACAGTAGGAATAAAATTCCAA
GGATTCCTCTAGTTGGAGTCAGTGTAGTCAGCTCAGAAGAAAGTGGAAAGAATGTTCTGG
GTCATGTTTTTGCTAGGAAGGGGAAATGGAAGCTGCTTTTCAAAGCCACTGCTTCCAATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGCTCTTGTTCGCCACCAGCGAATTCACACTGGAGAGAAGCCTTTGAATGTAATGGGAG
TGAGCAAAAGTTCGCTCAGAGTTACTGCTGAATTAAATATCGGCGAGTCTACCTGAAAGA
GAGCCACACATCTATCTTCCTCACTTCCTCTGAGTCTCAAGAGCTCCTGCCTTACCATAA
TAGGACGGACAACTTCAGGCGTGTCCCTTCCGACTCAGACCTTTGACCTTAGAGAATGGG
GCAGATTGGGCAGATCATCCTGGTGCAGTGATTAGTAACCTAGTCAGTTTCCCCAGCAAT
GACACCAGCCTTGAGAGATTAGGATGCAGGCGGCGGATTAACTGCCGGGAGTAGTGGGGA
GCTCGGGGACCAGTCTCCTTCCGCTTTGGAAGGGAGTTTGCACTAGACCATTTTTTCTCA
CACCAGAGGAGCCTTTCTTTCCAAGGTGGAGATGGAAGCACAGTAGGAATAAAATTCCAA
GGATTCCTCTAGTTGGAGTCAGTGTAGTCAGCTCAGAAGAAAGTGGAAAGAATGTTCTGG
GTCATGTTTTTGCTAGGAAGGGGAAATGGAAGCTGCTTTTCAAAGCCACTGCTTCCAATC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               3-600, gnl|bosTau2|chr25 (33156834-33156247)
               

               
               3-600, gnl|Hg17|chr7 (99313530-99312971)
               

               
               3-600, gnl|Mm7|chr5 (137090217-137089487)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-600, gnl|bosTau2|chr25 (33156834-33156247)
               

               
               3-600, gnl|Hg17|chr7 (99313530-99312971)
               

               
               3-600, gnl|Mm7|chr5 (137090217-137089487)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               elu (0.385356)
               

               
               mcp (0.170648)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               elu (0.385356)
               

               
               mcp (0.170648)

	3-600, gnl\|bosTau2\|chr25 (33156834-33156247)
	3-600, gnl\|Hg17\|chr7 (99313530-99312971)
	3-600, gnl\|Mm7\|chr5 (137090217-137089487)