Ss1.1-relu1335c_e10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATGGGATGGAGTCGGTCCTATCCCAGGACTGTCGAAGTCCCCCAAAGGGGTTGAGATGCT ATGGCATCCGTCAGTGGTAAAACCATACCTGACCCTTCTAGCAGAAAGTTCCAACCCAGC CACCCTGGAAGGCTCTGCAGGATCTCTCCAGAACCTCTCTGCTGGAAACTGGAAGTTTGC AGCGTATATCCGAGCAGCTGTCCGCAAAGAAAAAGGGCTCCCCATCCTTGTAGAACTTCT GCGGATGGATAACGATAGAGTTGTTTCTTCTGTGGCGACCGCCTTGAGGAATATGGCCCT AGATGTTCGCAACAAGGAACTCATAGGTAAATATGCCATGCGTGACCTGGTCAACCGGCT TCCCGGGGGCTCTGGCCCGAGTGTGCTGTCGGATGAGACTGTGGCGGCCATCTGCTGCGC CCTGCATGAGGTCACCAGCAAGAACATGGAGAACGCCAAGGCCCTGGCCGACTCAGGGGG CATAGAAAAGCTGGTGAACATAACCAAGGGCAGAGGAGACAGATCGTCTCTGAAAGTGGT AAAGGCAGCAGCCCAGGTCTTGAATACATTATGGCAATATCGGGACCTCCGGAGCATTTA TAAAAAGGATGGGTGGAATCAGAACCATTTTATTACACCTGTGTCAACGTTAGAGCGAGA CCGATTCAAATCACACCCTTCCTTGTCTACCACCAACCAACAGATGTCACCCGTCATTCA GTCAGTCGGCAGCACCTCTTCCTCACCAGCACTGTTAGGAATCAGAGACCCTCGCTCTGA ATACGATAGGACCCAGCCACCTATGCAGTATTACAGTAGCCAAGGGGATGCCACTCATAG AGGCCTGTACCCTGGCTCCAGCAAACCTTCACCAATTTACATCAGTTCCTATTCCTCACC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATGGGATGGAGTCGGTCCTATCCCAGGACTGTCGAAGTCCCCCAAAGGGGTTGAGATGCT ATGGCATCCGTCAGTGGTAAAACCATACCTGACCCTTCTAGCAGAAAGTTCCAACCCAGC CACCCTGGAAGGCTCTGCAGGATCTCTCCAGAACCTCTCTGCTGGAAACTGGAAGTTTGC AGCGTATATCCGAGCAGCTGTCCGCAAAGAAAAAGGGCTCCCCATCCTTGTAGAACTTCT GCGGATGGATAACGATAGAGTTGTTTCTTCTGTGGCGACCGCCTTGAGGAATATGGCCCT AGATGTTCGCAACAAGGAACTCATAGGTAAATATGCCATGCGTGACCTGGTCAACCGGCT TCCCGGGGGCTCTGGCCCGAGTGTGCTGTCGGATGAGACTGTGGCGGCCATCTGCTGCGC CCTGCATGAGGTCACCAGCAAGAACATGGAGAACGCCAAGGCCCTGGCCGACTCAGGGGG CATAGAAAAGCTGGTGAACATAACCAAGGGCAGAGGAGACAGATCGTCTCTGAAAGTGGT AAAGGCAGCAGCCCAGGTCTTGAATACATTATGGCAATATCGGGACCTCCGGAGCATTTA TAAAAAGGATGGGTGGAATCAGAACCATTTTATTACACCTGTGTCAACGTTAGAGCGAGA CCGATTCAAATCACACCCTTCCTTGTCTACCACCAACCAACAGATGTCACCCGTCATTCA GTCAGTCGGCAGCACCTCTTCCTCACCAGCACTGTTAGGAATCAGAGACCCTCGCTCTGA ATACGATAGGACCCAGCCACCTATGCAGTATTACAGTAGCCAAGGGGATGCCACTCATAG AGGCCTGTACCCTGGCTCCAGCAAACCTTCACCAATTTACATCAGTTCCTATTCCTCACC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
| 2-175, gnl|bosTau2|chr20 (35765409-35765582) | |
| 2-175, gnl|canFam2|chr34 (6329249-6329045) | |
| 2-175, gnl|danRer3|chr24 (19485849-19486056) | |
| 2-175, gnl|dasNov1|scaffold_1946 (95302-95097) | |
| 2-175, gnl|echTel1|scaffold_291446 (38433-38229) | |
| 2-175, gnl|fr1|chrUn (115855089-115854881) | |
| 2-175, gnl|galGal2|chr2 (77829287-77829090) | |
| 2-175, gnl|hg17|chr5 (11151685-11151889) | |
| 2-175, gnl|Hg17|chr5 (11151860-11151687) | |
| 2-175, gnl|loxAfr1|scaffold_1040 (41154-41358) | |
| 2-175, gnl|mm7|chr15 (31011111-31010907) | |
| 2-175, gnl|Mm7|chr15 (31010934-31011107) | |
| 2-175, gnl|monDom2|scaffold_4 (31227473-31227676) | |
| 2-175, gnl|oryCun1|scaffold_181747 (23362-23567) | |
| 2-175, gnl|panTro1|chr4 (11557738-11557942) | |
| 2-175, gnl|rheMac2|chr6 (11034483-11034687) | |
| 2-175, gnl|rn3|chr2 (82926625-82926423) | |
| 2-175, gnl|tetNig1|chrUn_random (16131418-16131625) | |
| 2-175, gnl|xenTro1|scaffold_605 (283697-283883) | |
| 325-521, gnl|bosTau2|chr20 (35979740-35979529) | |
| 325-521, gnl|canFam2|chr34 (6395801-6395575) | |
| 325-521, gnl|danRer3|chr24 (19446249-19446497) | |
| 325-521, gnl|dasNov1|scaffold_1803 (68096-67886) | |
| 325-521, gnl|echTel1|scaffold_276314 (3357-3131) | |
| 325-521, gnl|fr1|chrUn (115856780-115856521) | |
| 325-521, gnl|galGal2|chr2 (77865837-77865612) | |
| 325-521, gnl|hg17|chr5 (11075869-11076095) | |
| 325-521, gnl|Hg17|chr5 (11076093-11075882) | |
| 325-521, gnl|loxAfr1|scaffold_15639 (13768-13991) | |
| 325-521, gnl|mm7|chr15 (31072252-31072028) | |
| 325-521, gnl|Mm7|chr15 (31072028-31072239) | |
| 325-521, gnl|monDom2|scaffold_4 (31158687-31158913) | |
| 325-521, gnl|oryCun1|scaffold_205366 (13493-13697) | |
| 325-521, gnl|panTro1|chr4 (11481865-11482091) | |
| 325-521, gnl|rheMac2|chr6 (10959202-10959428) | |
| 325-521, gnl|rn3|chr2 (82985426-82985207) | |
| 325-521, gnl|tetNig1|chrUn_random (16129498-16129753) | |
| 325-521, gnl|xenTro1|scaffold_605 (249357-249579) | |
| 722-855, gnl|bosTau2|chr2 (27581539-27581672) | |
| 722-855, gnl|Hg17|chr2 (159358754-159358887) | |
| 722-855, gnl|Mm7|chr2 (59281039-59281172) |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-175, gnl|bosTau2|chr20 (35765409-35765582) | |
| 2-175, gnl|canFam2|chr34 (6329249-6329045) | |
| 2-175, gnl|danRer3|chr24 (19485849-19486056) | |
| 2-175, gnl|dasNov1|scaffold_1946 (95302-95097) | |
| 2-175, gnl|echTel1|scaffold_291446 (38433-38229) | |
| 2-175, gnl|fr1|chrUn (115855089-115854881) | |
| 2-175, gnl|galGal2|chr2 (77829287-77829090) | |
| 2-175, gnl|hg17|chr5 (11151685-11151889) | |
| 2-175, gnl|Hg17|chr5 (11151860-11151687) | |
| 2-175, gnl|loxAfr1|scaffold_1040 (41154-41358) | |
| 2-175, gnl|mm7|chr15 (31011111-31010907) | |
| 2-175, gnl|Mm7|chr15 (31010934-31011107) | |
| 2-175, gnl|monDom2|scaffold_4 (31227473-31227676) | |
| 2-175, gnl|oryCun1|scaffold_181747 (23362-23567) | |
| 2-175, gnl|panTro1|chr4 (11557738-11557942) | |
| 2-175, gnl|rheMac2|chr6 (11034483-11034687) | |
| 2-175, gnl|rn3|chr2 (82926625-82926423) | |
| 2-175, gnl|tetNig1|chrUn_random (16131418-16131625) | |
| 2-175, gnl|xenTro1|scaffold_605 (283697-283883) | |
| 325-521, gnl|bosTau2|chr20 (35979740-35979529) | |
| 325-521, gnl|canFam2|chr34 (6395801-6395575) | |
| 325-521, gnl|danRer3|chr24 (19446249-19446497) | |
| 325-521, gnl|dasNov1|scaffold_1803 (68096-67886) | |
| 325-521, gnl|echTel1|scaffold_276314 (3357-3131) | |
| 325-521, gnl|fr1|chrUn (115856780-115856521) | |
| 325-521, gnl|galGal2|chr2 (77865837-77865612) | |
| 325-521, gnl|hg17|chr5 (11075869-11076095) | |
| 325-521, gnl|Hg17|chr5 (11076093-11075882) | |
| 325-521, gnl|loxAfr1|scaffold_15639 (13768-13991) | |
| 325-521, gnl|mm7|chr15 (31072252-31072028) | |
| 325-521, gnl|Mm7|chr15 (31072028-31072239) | |
| 325-521, gnl|monDom2|scaffold_4 (31158687-31158913) | |
| 325-521, gnl|oryCun1|scaffold_205366 (13493-13697) | |
| 325-521, gnl|panTro1|chr4 (11481865-11482091) | |
| 325-521, gnl|rheMac2|chr6 (10959202-10959428) | |
| 325-521, gnl|rn3|chr2 (82985426-82985207) | |
| 325-521, gnl|tetNig1|chrUn_random (16129498-16129753) | |
| 325-521, gnl|xenTro1|scaffold_605 (249357-249579) | |
| 722-855, gnl|bosTau2|chr2 (27581539-27581672) | |
| 722-855, gnl|Hg17|chr2 (159358754-159358887) | |
| 722-855, gnl|Mm7|chr2 (59281039-59281172) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| elu (0.770713) | |
| fbs (0.175346) |