Non-Coding RNA Search

Ss1.1-reru01c_a19.5

Sequence:


               
               AGGAGGTAGGGACCATTTTGATGTCAGACTTTTGGTAGCTGGACATGTTCTTGATACAGG
CGACTGGTCATAACTTCTGAGCCAGAGTGAAATTACTGGAGGGAGGACTTCTGGCCGCTG
CTCTAAATGGAGTCAAGGGAAGCTGCCGTCTCCCTAGAGATGGTGCTTGTCAGAGCCTTG
TGGATCAGTCTCAAGGGGCCCCTGGCAGAGATGAGGGAGAGCAGTGACTTTAGCTGAGTC
CCTGCCAGTGGCTGAGTAAACAATGATTTCAAAAACTCAAGGTCCCCAAATGGCAGCATT
TTATGTTCTGACCTGTTTGTGTTATATAGTGTTTTTTTTTTTTTTGTTTTTGTTTTTTTT
GTTTTTTTCCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGAGGTAGGGACCATTTTGATGTCAGACTTTTGGTAGCTGGACATGTTCTTGATACAGG
CGACTGGTCATAACTTCTGAGCCAGAGTGAAATTACTGGAGGGAGGACTTCTGGCCGCTG
CTCTAAATGGAGTCAAGGGAAGCTGCCGTCTCCCTAGAGATGGTGCTTGTCAGAGCCTTG
TGGATCAGTCTCAAGGGGCCCCTGGCAGAGATGAGGGAGAGCAGTGACTTTAGCTGAGTC
CCTGCCAGTGGCTGAGTAAACAATGATTTCAAAAACTCAAGGTCCCCAAATGGCAGCATT
TTATGTTCTGACCTGTTTGTGTTATATAGTGTTTTTTTTTTTTTTGTTTTTGTTTTTTTT
GTTTTTTTCCTC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               110-343, gnl|bosTau2|chr13 (54830572-54830339)
               

               
               110-343, gnl|Hg17|chr20 (44123333-44123105)
               

               
               110-343, gnl|Mm7|chr2 (164741315-164741084)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               110-343, gnl|bosTau2|chr13 (54830572-54830339)
               

               
               110-343, gnl|Hg17|chr20 (44123333-44123105)
               

               
               110-343, gnl|Mm7|chr2 (164741315-164741084)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               amn (0.417711)
               

               
               fce (0.271592)
               

               
               pla (0.133672)
               

               
               eru (0.120048)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               amn (0.417711)
               

               
               fce (0.271592)
               

               
               pla (0.133672)
               

               
               eru (0.120048)

	110-343, gnl\|bosTau2\|chr13 (54830572-54830339)
	110-343, gnl\|Hg17\|chr20 (44123333-44123105)
	110-343, gnl\|Mm7\|chr2 (164741315-164741084)