Non-Coding RNA Search

Ss1.1-reru01c_a7.5

Sequence:


               
               TGAGGCTCAGATCAACTTGCTCTTAAAAAAAGAGAAGGAATAAATAGTGCTTTAAATGTT
ATGTGTATATAGTTTGAAAACAAAATGTTTAATATTTATAAAACATCTCACTTTCCAAAG
AGGTAGTCGTTAGGGGCAAAGATTGGTGTATTATAAATACTTTATTTTTTAATATCAACT
AAAATACCATCTTGAGCTAATTTTGACACTGAATTCCAGATATATCTGCTGCATATTATT
AGCCTCTTGTATATTGCCTGATATAACTGTATTTGCACTGAAAAACTTATAGAAAAAGTG
TCTATTTGGGGTATTTATAGGCCTTCATCTGGACATCTGCTCTACATTTACAGAAAAAGT
TTTTAGCCTCATAATCTTCATTCAATGTAATGTTCTGACAGAATTTTAATTATATGGTTT
CAAAAATTACATATTCACTCGGACTGGATGTTTCTAGTTATGGACACAATTCATTTCTGA
ATTTATACCAACACTTGAATGTTGGCTGGGGTATAATACAGATGACAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGAGGCTCAGATCAACTTGCTCTTAAAAAAAGAGAAGGAATAAATAGTGCTTTAAATGTT
ATGTGTATATAGTTTGAAAACAAAATGTTTAATATTTATAAAACATCTCACTTTCCAAAG
AGGTAGTCGTTAGGGGCAAAGATTGGTGTATTATAAATACTTTATTTTTTAATATCAACT
AAAATACCATCTTGAGCTAATTTTGACACTGAATTCCAGATATATCTGCTGCATATTATT
AGCCTCTTGTATATTGCCTGATATAACTGTATTTGCACTGAAAAACTTATAGAAAAAGTG
TCTATTTGGGGTATTTATAGGCCTTCATCTGGACATCTGCTCTACATTTACAGAAAAAGT
TTTTAGCCTCATAATCTTCATTCAATGTAATGTTCTGACAGAATTTTAATTATATGGTTT
CAAAAATTACATATTCACTCGGACTGGATGTTTCTAGTTATGGACACAATTCATTTCTGA
ATTTATACCAACACTTGAATGTTGGCTGGGGTATAATACAGATGACAT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-527, gnl|bosTau2|chr24 (19491396-19491912)
               

               
               1-527, gnl|Hg17|chr18 (27192053-27192579)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-527, gnl|bosTau2|chr24 (19491396-19491912)
               

               
               1-527, gnl|Hg17|chr18 (27192053-27192579)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               csk (0.140746)
               

               
               eru (0.120048)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               csk (0.140746)
               

               
               eru (0.120048)

	1-527, gnl\|bosTau2\|chr24 (19491396-19491912)
	1-527, gnl\|Hg17\|chr18 (27192053-27192579)