Non-Coding RNA Search

Ss1.1-reru02c_f3.5

Sequence:


               
               TAAACTGTGCTGTATCTATGGCATTTGAAGATAAAGAGATGCCCAATCATTATGACCTGG
ACTGTCCTACAGCCCCAGTTCCATGCACATTCAGTACTTTCGGCTGCCATGAAAAGATGC
AGAGGAATCACTTGGCACGCCACCTGCAAGAGAATACCCAGTCGCACATGAGAATGATGG
CCCAGGCTCTTCAGGGTTTAAGCCTCGCAGTAGCTCCTGTACCTCAGCGTGATATGCTTC
CCTATGATTCTTCCCCTTTGTCTCGGATTTCCTCTGGCTGTTGCTCAGACCAGAATTTCC
AGGAAACCATTCAGCAGTTAGAAGGTCGCCTTGTAAGACAGGACCATCAAATCCGGGAGC
TAACTGCGAAAATGGAAACTCAGAGCATGTACGTAAGTGAGCTCAAAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAAACTGTGCTGTATCTATGGCATTTGAAGATAAAGAGATGCCCAATCATTATGACCTGG
ACTGTCCTACAGCCCCAGTTCCATGCACATTCAGTACTTTCGGCTGCCATGAAAAGATGC
AGAGGAATCACTTGGCACGCCACCTGCAAGAGAATACCCAGTCGCACATGAGAATGATGG
CCCAGGCTCTTCAGGGTTTAAGCCTCGCAGTAGCTCCTGTACCTCAGCGTGATATGCTTC
CCTATGATTCTTCCCCTTTGTCTCGGATTTCCTCTGGCTGTTGCTCAGACCAGAATTTCC
AGGAAACCATTCAGCAGTTAGAAGGTCGCCTTGTAAGACAGGACCATCAAATCCGGGAGC
TAACTGCGAAAATGGAAACTCAGAGCATGTACGTAAGTGAGCTCAAAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               115-406, gnl|bosTau2|chr15 (41229736-41230030)
               

               
               115-406, gnl|Hg17|chr11 (36468778-36468541)
               

               
               115-406, gnl|Mm7|chr2 (101547377-101547638)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               115-406, gnl|bosTau2|chr15 (41229736-41230030)
               

               
               115-406, gnl|Hg17|chr11 (36468778-36468541)
               

               
               115-406, gnl|Mm7|chr2 (101547377-101547638)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               cbl (0.229595)
               

               
               eru (0.120048)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.229595)
               

               
               eru (0.120048)

	115-406, gnl\|bosTau2\|chr15 (41229736-41230030)
	115-406, gnl\|Hg17\|chr11 (36468778-36468541)
	115-406, gnl\|Mm7\|chr2 (101547377-101547638)