Non-Coding RNA Search

Ss1.1-reru05c_d2.5

Sequence:


               
               AGATCAGGATCATTTCTAGTCAGGACTCTGGTCGAAGAGATCACGGAAGAACAGTATTAC
ATGATGCGGAGATATGAAAGCTCTTTCTTGGCACCCCCCGCCTCGCCCTCCCAAACGTCC
CTCGGTGGAGGAAACAAAGTTAACCCTGCTCGGCTTAGCAGAAGAAAGGGCAGTGAGTCT
GCCTAAGTCTCCCAAGAGTCTCCATGTAGACATATCCAAGAAACTGCACTCAAATCAAGC
TGGCCTGGATTCAAATGTACCAGTTGGTTGTCAAAATGATTTGGCTTTTCTGGAAAAAGA
AAGGAGAAAGACTGGAGCAAGTGCAGTAGCAGGCACCAGTGCAACCAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGATCAGGATCATTTCTAGTCAGGACTCTGGTCGAAGAGATCACGGAAGAACAGTATTAC
ATGATGCGGAGATATGAAAGCTCTTTCTTGGCACCCCCCGCCTCGCCCTCCCAAACGTCC
CTCGGTGGAGGAAACAAAGTTAACCCTGCTCGGCTTAGCAGAAGAAAGGGCAGTGAGTCT
GCCTAAGTCTCCCAAGAGTCTCCATGTAGACATATCCAAGAAACTGCACTCAAATCAAGC
TGGCCTGGATTCAAATGTACCAGTTGGTTGTCAAAATGATTTGGCTTTTCTGGAAAAAGA
AAGGAGAAAGACTGGAGCAAGTGCAGTAGCAGGCACCAGTGCAACCAC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q9BH02_MACFA

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q9BH02_MACFA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-196, gnl|bosTau2|chr13 (46061877-46062067)
               

               
               5-196, gnl|Hg17|chr6 (128175911-128175721)
               

               
               5-196, gnl|Mm7|chr10 (28563230-28563420)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-196, gnl|bosTau2|chr13 (46061877-46062067)
               

               
               5-196, gnl|Hg17|chr6 (128175911-128175721)
               

               
               5-196, gnl|Mm7|chr10 (28563230-28563420)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               amn (0.417711)
               

               
               eru (0.120048)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               amn (0.417711)
               

               
               eru (0.120048)

	5-196, gnl\|bosTau2\|chr13 (46061877-46062067)
	5-196, gnl\|Hg17\|chr6 (128175911-128175721)
	5-196, gnl\|Mm7\|chr10 (28563230-28563420)