Ss1.1-reru10c_h13.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AAATTCCTCGCAGTTATGCAGTAGGCGTTAGGAAACCAGGACCGCCCAGAGACCTGAGAC TTTAGGAGTTTAAAAGATGAAATGGACCCTTTTTTATTTTTATTTTTTGCTAGTTTGTTG TTTTTTGGGTTTTGTTTTAGTTCTGTATGTATTTTAGCAATCTCATGTCACCTGACTGGG ATGTGTGTCAAGAATATTCCTTTTATGGAAAAGGACTGAAAAAAAAAACAAAAACCCTAA AGTATTCTAGGGAGAAACTGTCTTCCATTTCAGTTTTGAATCAGTATTGTTACTCTCGAA ACACCTTCTTTTAAAAAAAAACAAAAAACTGTAAGCCCACTCCTCCCCCCATTTTTTTAG TAAACCGCTGTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AAATTCCTCGCAGTTATGCAGTAGGCGTTAGGAAACCAGGACCGCCCAGAGACCTGAGAC TTTAGGAGTTTAAAAGATGAAATGGACCCTTTTTTATTTTTATTTTTTGCTAGTTTGTTG TTTTTTGGGTTTTGTTTTAGTTCTGTATGTATTTTAGCAATCTCATGTCACCTGACTGGG ATGTGTGTCAAGAATATTCCTTTTATGGAAAAGGACTGAAAAAAAAAACAAAAACCCTAA AGTATTCTAGGGAGAAACTGTCTTCCATTTCAGTTTTGAATCAGTATTGTTACTCTCGAA ACACCTTCTTTTAAAAAAAAACAAAAAACTGTAAGCCCACTCCTCCCCCCATTTTTTTAG TAAACCGCTGTC |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 114-311, + strand, RNAz p=0.894174 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 114-311, + strand, RNAz p=0.894174 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of NM_000168, + |
| Aligned organism(s): 3 entry(ies) | More info |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
| 114-371, gnl|bosTau2|chr4 (45823310-45823561) | |
| 114-371, gnl|Hg17|chr7 (41777103-41776868) | |
| 114-371, gnl|Mm7|chr13 (15093793-15094032) |
| Aligned organism(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 114-371, gnl|bosTau2|chr4 (45823310-45823561) | |
| 114-371, gnl|Hg17|chr7 (41777103-41776868) | |
| 114-371, gnl|Mm7|chr13 (15093793-15094032) |
| Expressed library(ies): 4 entry(ies) | More info |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
| cut (0.169924) | |
| eru (0.120048) | |
| ecc (0.115035) | |
| jca (0.11396) |
| Expressed library(ies): 4 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cut (0.169924) | |
| eru (0.120048) | |
| ecc (0.115035) | |
| jca (0.11396) |