Ss1.1-reru10c_j1.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATCAGATAGGGCCACTTTGCAGAAGAACATCGTAGGATCAAGTTCTGCTGCAGATTTCTC TGCTATTAAGGAGCTAGATACCCTTAACAATGAAATAGTTGACCTACAGAGGGAAAAGAA TAATGTGGAACAGGACCTTAAGGAAAAAGAAGATACTATTAAACAGAGAACAAGCGAGGT TCAGGATCTTCAAGATGAAGTTCAGAGGGAGAATACTAATCTGCAAAAACTACAGGCCCA GAAACAGCAAGTACAGGAACTCCTTGATGGACTGGATGAGCAGAAGGCCCAGCTGGAGGA GCAACTGCAGGAAGTCAGAAAGAAGTGTGCTGAAGAGGCCCAGCTGATCTCATCCCTAAA AGCTGAAATAACGAGTCAAGAATCACAGATCTCCACTTACGAAGAAGAGCTGGCCAAAGC TAGGGAAGAGCTGAGTCGTCTACAGCAAGAAACTGCAGAGTTGGAGGAGAGTGTGGAGTC AGGGAAGGCTCAGCTGGGACCTCTTCAGCAGCACCTGCAAGATTCACAGCAGGAAATCAG TTCATTACAAATGAAACTGATGGAAATGAAAGAACTGGAAAACAATAATAATCAATCAAA TTGGTGCAGTAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATCAGATAGGGCCACTTTGCAGAAGAACATCGTAGGATCAAGTTCTGCTGCAGATTTCTC TGCTATTAAGGAGCTAGATACCCTTAACAATGAAATAGTTGACCTACAGAGGGAAAAGAA TAATGTGGAACAGGACCTTAAGGAAAAAGAAGATACTATTAAACAGAGAACAAGCGAGGT TCAGGATCTTCAAGATGAAGTTCAGAGGGAGAATACTAATCTGCAAAAACTACAGGCCCA GAAACAGCAAGTACAGGAACTCCTTGATGGACTGGATGAGCAGAAGGCCCAGCTGGAGGA GCAACTGCAGGAAGTCAGAAAGAAGTGTGCTGAAGAGGCCCAGCTGATCTCATCCCTAAA AGCTGAAATAACGAGTCAAGAATCACAGATCTCCACTTACGAAGAAGAGCTGGCCAAAGC TAGGGAAGAGCTGAGTCGTCTACAGCAAGAAACTGCAGAGTTGGAGGAGAGTGTGGAGTC AGGGAAGGCTCAGCTGGGACCTCTTCAGCAGCACCTGCAAGATTCACAGCAGGAAATCAG TTCATTACAAATGAAACTGATGGAAATGAAAGAACTGGAAAACAATAATAATCAATCAAA TTGGTGCAGTAG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 19 entry(ies) | More info |
| Aligned organism(s): 19 entry(ies) | Help | Less info |
| 346-547, gnl|bosTau2|chr3 (64401320-64401521) | |
| 346-547, gnl|canFam2|chr15 (12856647-12856413) | |
| 346-547, gnl|danRer3|chr22 (14688756-14688526) | |
| 346-547, gnl|dasNov1|scaffold_14963 (86208-85974) | |
| 346-547, gnl|echTel1|scaffold_317459 (51671-51437) | |
| 346-547, gnl|fr1|chrUn (227629919-227629697) | |
| 346-547, gnl|galGal2|chr8 (24320626-24320853) | |
| 346-547, gnl|hg17|chr1 (51585818-51586052) | |
| 346-547, gnl|Hg17|chr1 (51586026-51585825) | |
| 346-547, gnl|loxAfr1|scaffold_149802 (4483-4249) | |
| 346-547, gnl|mm7|chr4 (108738313-108738089) | |
| 346-547, gnl|Mm7|chr4 (108738108-108738309) | |
| 346-547, gnl|monDom2|scaffold_70 (2146175-2145943) | |
| 346-547, gnl|oryCun1|scaffold_130217 (7223-6990) | |
| 346-547, gnl|panTro1|chr1 (49797395-49797629) | |
| 346-547, gnl|rheMac2|chr1 (54221478-54221712) | |
| 346-547, gnl|rn3|chr5 (130719254-130719027) | |
| 346-547, gnl|tetNig1|chr15_random (2687563-2687737) | |
| 346-547, gnl|xenTro1|scaffold_816 (132063-131835) |
| Aligned organism(s): 19 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 346-547, gnl|bosTau2|chr3 (64401320-64401521) | |
| 346-547, gnl|canFam2|chr15 (12856647-12856413) | |
| 346-547, gnl|danRer3|chr22 (14688756-14688526) | |
| 346-547, gnl|dasNov1|scaffold_14963 (86208-85974) | |
| 346-547, gnl|echTel1|scaffold_317459 (51671-51437) | |
| 346-547, gnl|fr1|chrUn (227629919-227629697) | |
| 346-547, gnl|galGal2|chr8 (24320626-24320853) | |
| 346-547, gnl|hg17|chr1 (51585818-51586052) | |
| 346-547, gnl|Hg17|chr1 (51586026-51585825) | |
| 346-547, gnl|loxAfr1|scaffold_149802 (4483-4249) | |
| 346-547, gnl|mm7|chr4 (108738313-108738089) | |
| 346-547, gnl|Mm7|chr4 (108738108-108738309) | |
| 346-547, gnl|monDom2|scaffold_70 (2146175-2145943) | |
| 346-547, gnl|oryCun1|scaffold_130217 (7223-6990) | |
| 346-547, gnl|panTro1|chr1 (49797395-49797629) | |
| 346-547, gnl|rheMac2|chr1 (54221478-54221712) | |
| 346-547, gnl|rn3|chr5 (130719254-130719027) | |
| 346-547, gnl|tetNig1|chr15_random (2687563-2687737) | |
| 346-547, gnl|xenTro1|scaffold_816 (132063-131835) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eru (0.240096) |