Non-Coding RNA Search

Ss1.1-reru12c_a12.5

Sequence:


               
               TTTTTTTCAAGAGAGATTGTGTTGGAGACTCAGTTGTCCTTGGTTTTATTTTATAAAATG
GCCTATAGTCCTCCGGAAGGTCTTAGCACCCTGTTAGAAACGTTCATTTAAAAAAAAGAA
AAAAAATCCCATGTGGAACTTCGCAGGGAAGTCGTGGGACTTTATTAGGACATTGGCAGA
AAGGAGCACGTTTTTATATTGCATTTCCCTTACTTGGTATCTCGCTCAACATTTTTTTCT
TTTTTGGGCTGACGAACATTCTATATTTATGAAGACATTCTTTAAAAATAAAACCACATA
AACGATCCCTTTACTATCAGATTGCTCTGATTTAGCCTTAATTTTGTTAAATTTTTTAGA
GATGATTGAAGTGCTGCTGTGGAAAGAAATGTACTATATACTATTTCTGTATCATTAAAA
TTAAATTTTTATGGTTCAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTCAAGAGAGATTGTGTTGGAGACTCAGTTGTCCTTGGTTTTATTTTATAAAATG
GCCTATAGTCCTCCGGAAGGTCTTAGCACCCTGTTAGAAACGTTCATTTAAAAAAAAGAA
AAAAAATCCCATGTGGAACTTCGCAGGGAAGTCGTGGGACTTTATTAGGACATTGGCAGA
AAGGAGCACGTTTTTATATTGCATTTCCCTTACTTGGTATCTCGCTCAACATTTTTTTCT
TTTTTGGGCTGACGAACATTCTATATTTATGAAGACATTCTTTAAAAATAAAACCACATA
AACGATCCCTTTACTATCAGATTGCTCTGATTTAGCCTTAATTTTGTTAAATTTTTTAGA
GATGATTGAAGTGCTGCTGTGGAAAGAAATGTACTATATACTATTTCTGTATCATTAAAA
TTAAATTTTTATGGTTCAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-436, gnl|bosTau2|chr18 (18423968-18424394)
               

               
               2-436, gnl|Hg17|chr16 (49392910-49393346)
               

               
               2-436, gnl|Mm7|chr8 (87343880-87344305)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-436, gnl|bosTau2|chr18 (18423968-18424394)
               

               
               2-436, gnl|Hg17|chr16 (49392910-49393346)
               

               
               2-436, gnl|Mm7|chr8 (87343880-87344305)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               lnt (0.142308)
               

               
               eru (0.120048)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lnt (0.142308)
               

               
               eru (0.120048)

	2-436, gnl\|bosTau2\|chr18 (18423968-18424394)
	2-436, gnl\|Hg17\|chr16 (49392910-49393346)
	2-436, gnl\|Mm7\|chr8 (87343880-87344305)