Non-Coding RNA Search

Ss1.1-reru12c_b22.5

Sequence:


               
               GGCCGATGACACGGTGTACATGGAGTACCACTCAGCCCGGAGCAAGGCAGCCACCAAGCA
CGTGCACCCGCTTTTCAAGCGCTTCAGGAAGTGACGCCCACAGGGTCATGTGCTGACATT
CGTGCTCTGTCAGTAGCATCAGCTAACCAGTCTAGACTCAGTATCTATGGACTGTTGAAG
AAAATGCATAAAGAGCTTGAGTCTGTCTTCACGGGTCATCTAGATTTAAAAGTGGAAGTT
GGTGGGACTATATATATATATATATATATATATATATATTTGGGTTTTTTTAAAGACTAC
TTTTTAAAATTGTTGGGGAGGTCATTCCTGTATATAAAAATTTGTAATACTTAAGTGTAT
TTTTCTTGATGTTCTCCTGAATAAACAGCAGTCGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCCGATGACACGGTGTACATGGAGTACCACTCAGCCCGGAGCAAGGCAGCCACCAAGCA
CGTGCACCCGCTTTTCAAGCGCTTCAGGAAGTGACGCCCACAGGGTCATGTGCTGACATT
CGTGCTCTGTCAGTAGCATCAGCTAACCAGTCTAGACTCAGTATCTATGGACTGTTGAAG
AAAATGCATAAAGAGCTTGAGTCTGTCTTCACGGGTCATCTAGATTTAAAAGTGGAAGTT
GGTGGGACTATATATATATATATATATATATATATATATTTGGGTTTTTTTAAAGACTAC
TTTTTAAAATTGTTGGGGAGGTCATTCCTGTATATAAAAATTTGTAATACTTAAGTGTAT
TTTTCTTGATGTTCTCCTGAATAAACAGCAGTCGGA

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

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               1-116, gnl|bosTau2|chr2 (1292971-1293087)
               

               
               1-116, gnl|Hg17|chr2 (127731495-127731378)
               

               
               1-116, gnl|Mm7|chr18 (32661874-32661989)
               


               
               273-396, gnl|bosTau2|chr2 (1293285-1293414)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-116, gnl|bosTau2|chr2 (1292971-1293087)
               

               
               1-116, gnl|Hg17|chr2 (127731495-127731378)
               

               
               1-116, gnl|Mm7|chr18 (32661874-32661989)
               


               
               273-396, gnl|bosTau2|chr2 (1293285-1293414)

Expressed library(ies): 3 entry(ies)

More info

Expressed library(ies): 3 entry(ies)

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               eru (0.240096)
               

               
               thg (0.126791)
               

               
               ese (0.126502)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eru (0.240096)
               

               
               thg (0.126791)
               

               
               ese (0.126502)

	1-116, gnl\|bosTau2\|chr2 (1292971-1293087)
	1-116, gnl\|Hg17\|chr2 (127731495-127731378)
	1-116, gnl\|Mm7\|chr18 (32661874-32661989)

	273-396, gnl\|bosTau2\|chr2 (1293285-1293414)