Non-Coding RNA Search

Ss1.1-reru12c_d12.5

Sequence:


               
               GCATGGAATGGTTCTCAAATAGAGATTATCTCTGATCACTTGCTGCAGTTTGTGGTCAAT
TGATCCTTTCTGAAACTGAAGACTCAGGTAATGTCGCAAATCTTTATTAATGACTTTGCC
TGGCTTCACAGTCTTGAGACGGATGGGCTCTCGGAAGTGGCGGATGACAGCCAGGGTATC
CCGGTTGGTAAGCCCGCTGACAGGCGTCCCGTTCACCTCCAGCAGCACATCCCCCGGGCT
GGGCGCCTTGCCCGAGACAACGCAGCAGGTGCCCCCACCGGGCTCCTCGCGGAGCCGCCC
CAGGTAGGGGAACTCGCCGCGCTCCGCGCCTCCCCGGATCTCGGAGCCCAAGTCGCCCGG
GGGCCCGGCCCAGGACACCGCGCACTCCTGCACCTTGCTGAGCCAGTGCTTCTTCTTCTT
CAGTGTCTTCGACATCCCGAACCCCGCTGCACCATGGGGAGGACCCCGCGCAGGCGGCAG
GGGTGCCGCTCCCGCCCCCTCTCAGCCTGGAGACCCCGGGCGGCCCGCGCAACCCGGCGA
GGGGGGCCTCACCGCTCCGGCACCCCCCCCACCGACCACAGCCCACTGGGGGCCGGGCCG
CTCCAAGCTCCGAGACGCCCCTCGGACGCCCTCCCGGTGACGCTCCCTGGGGCTGGCCGG
AATCCGCGAGGACCACCCTGGGTTAGGCTGAAGAAAGGAGAAGGGGATTGTCCCCGGGCG
GCTCCAGAGGGGTTTCGGGCGGGGTCACAGCCGACGGCTGGCCCCCGGGCTCCGCGCCGG
AGCGGCGGGAAAGGCTGAAGCAGGGGGCGGGGAGGTGAAGAGGGAAGAGCCGGAAAGGAA
AAAATCCGTCGGGGGCGCGCAGAAGCGCGCGTAGACCCGTCGCAGGATCGATCGTGGCCG
CTGCGGAGCTGGAGCGCGGAGACCAACGCCTGCCCGAGCTGCCAGGAAACTGCCGCTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCATGGAATGGTTCTCAAATAGAGATTATCTCTGATCACTTGCTGCAGTTTGTGGTCAAT
TGATCCTTTCTGAAACTGAAGACTCAGGTAATGTCGCAAATCTTTATTAATGACTTTGCC
TGGCTTCACAGTCTTGAGACGGATGGGCTCTCGGAAGTGGCGGATGACAGCCAGGGTATC
CCGGTTGGTAAGCCCGCTGACAGGCGTCCCGTTCACCTCCAGCAGCACATCCCCCGGGCT
GGGCGCCTTGCCCGAGACAACGCAGCAGGTGCCCCCACCGGGCTCCTCGCGGAGCCGCCC
CAGGTAGGGGAACTCGCCGCGCTCCGCGCCTCCCCGGATCTCGGAGCCCAAGTCGCCCGG
GGGCCCGGCCCAGGACACCGCGCACTCCTGCACCTTGCTGAGCCAGTGCTTCTTCTTCTT
CAGTGTCTTCGACATCCCGAACCCCGCTGCACCATGGGGAGGACCCCGCGCAGGCGGCAG
GGGTGCCGCTCCCGCCCCCTCTCAGCCTGGAGACCCCGGGCGGCCCGCGCAACCCGGCGA
GGGGGGCCTCACCGCTCCGGCACCCCCCCCACCGACCACAGCCCACTGGGGGCCGGGCCG
CTCCAAGCTCCGAGACGCCCCTCGGACGCCCTCCCGGTGACGCTCCCTGGGGCTGGCCGG
AATCCGCGAGGACCACCCTGGGTTAGGCTGAAGAAAGGAGAAGGGGATTGTCCCCGGGCG
GCTCCAGAGGGGTTTCGGGCGGGGTCACAGCCGACGGCTGGCCCCCGGGCTCCGCGCCGG
AGCGGCGGGAAAGGCTGAAGCAGGGGGCGGGGAGGTGAAGAGGGAAGAGCCGGAAAGGAA
AAAATCCGTCGGGGGCGCGCAGAAGCGCGCGTAGACCCGTCGCAGGATCGATCGTGGCCG
CTGCGGAGCTGGAGCGCGGAGACCAACGCCTGCCCGAGCTGCCAGGAAACTGCCGCTTTT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61859180|ref|XP_618321.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61859180|ref|XP_618321.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               119-860, gnl|bosTau2|chr3 (24860203-24860945)
               

               
               119-860, gnl|Hg17|chr1 (113646014-113645270)
               

               
               119-860, gnl|Mm7|chr3 (104013628-104014253)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               119-860, gnl|bosTau2|chr3 (24860203-24860945)
               

               
               119-860, gnl|Hg17|chr1 (113646014-113645270)
               

               
               119-860, gnl|Mm7|chr3 (104013628-104014253)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eru (0.120048)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eru (0.120048)

	119-860, gnl\|bosTau2\|chr3 (24860203-24860945)
	119-860, gnl\|Hg17\|chr1 (113646014-113645270)
	119-860, gnl\|Mm7\|chr3 (104013628-104014253)