Non-Coding RNA Search

Ss1.1-reru14c_l9.5

Sequence:


               
               GTACAAGCTGAGCCTGCTGATGGCCGAGTCCCTGCGCACGGACCGCGTGGCCCCCGTGCT
GTACCAGCCACACCTGGAGGCACTGGACCGGCGGCTGCGTGTGGTGCTACAGGCGGTCAG
AGACTGCGTGGAGAGGGACGGGCTGCCCAGCGTCGTGGAGGATGACATGGGCCCCGAGCG
CAGAGCCTCCACCGGGAGGTAGTGACCGCGAGCCGCGGCCAGGCCAGCCACTGAGGGACA
CGGGCGCACGCAGGAGCAGACGGGCCGCCCGGGCCTCGCTTTCTTCGCTTTCCAGACCAC
GCGGGCTGGGGGAGCGGCCTGCGCCCACGGACAGAGGCGGCCTGGCTGCAGGCCACCCAC
CCTTTTGTACGGAAAGGAAGCCTTTCTTTACTATTTTGTATTTATACCTGGTGTAAATGT
ATAAACGTAGAGACGGCTCTATGGCCCCGGACCACCTGGCAGACCCCATGCAGGCGCACC
CTGCCCGCGGCCATGTGCTCCTGCGAAGGGCTCTCACTCTGACCGAACTTATGGCAAAAC
TCCCCCTTCCCCGGGCCGAGAGTCACCTGGGGCTGCGGGAGACTCCCGAGGACGTGTCGC
AGATTCTCGGCGATGGACGAATACCGCATAGGCCTCAGGTGATCGAAGGACCAGTCATTC
CCTGGCTGCTCAGCCTCCTCGCGGCCCCTTCTGACTCACTTCAGAAGCCCGTGCGCGTGA
GAGGCACTGTCTGGTGGCCGGGCAGCTGGTTACCTTCACAGCGTTTCCGTGGAGTAGTTT
GCAATGTGTACAAGTGCAATAAAGATTCAGCAAGTGAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTACAAGCTGAGCCTGCTGATGGCCGAGTCCCTGCGCACGGACCGCGTGGCCCCCGTGCT
GTACCAGCCACACCTGGAGGCACTGGACCGGCGGCTGCGTGTGGTGCTACAGGCGGTCAG
AGACTGCGTGGAGAGGGACGGGCTGCCCAGCGTCGTGGAGGATGACATGGGCCCCGAGCG
CAGAGCCTCCACCGGGAGGTAGTGACCGCGAGCCGCGGCCAGGCCAGCCACTGAGGGACA
CGGGCGCACGCAGGAGCAGACGGGCCGCCCGGGCCTCGCTTTCTTCGCTTTCCAGACCAC
GCGGGCTGGGGGAGCGGCCTGCGCCCACGGACAGAGGCGGCCTGGCTGCAGGCCACCCAC
CCTTTTGTACGGAAAGGAAGCCTTTCTTTACTATTTTGTATTTATACCTGGTGTAAATGT
ATAAACGTAGAGACGGCTCTATGGCCCCGGACCACCTGGCAGACCCCATGCAGGCGCACC
CTGCCCGCGGCCATGTGCTCCTGCGAAGGGCTCTCACTCTGACCGAACTTATGGCAAAAC
TCCCCCTTCCCCGGGCCGAGAGTCACCTGGGGCTGCGGGAGACTCCCGAGGACGTGTCGC
AGATTCTCGGCGATGGACGAATACCGCATAGGCCTCAGGTGATCGAAGGACCAGTCATTC
CCTGGCTGCTCAGCCTCCTCGCGGCCCCTTCTGACTCACTTCAGAAGCCCGTGCGCGTGA
GAGGCACTGTCTGGTGGCCGGGCAGCTGGTTACCTTCACAGCGTTTCCGTGGAGTAGTTT
GCAATGTGTACAAGTGCAATAAAGATTCAGCAAGTGAAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               7-815, gnl|bosTau2|chr4 (756142-755378)
               

               
               7-815, gnl|Mm7|chr5 (137781272-137782170)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-815, gnl|bosTau2|chr4 (756142-755378)
               

               
               7-815, gnl|Mm7|chr5 (137781272-137782170)

Expressed library(ies): 6 entry(ies)

More info

Expressed library(ies): 6 entry(ies)

Help | Less info


               
               cli (0.305623)
               

               
               cut (0.169924)
               

               
               fhi (0.169578)
               

               
               eli (0.151814)
               

               
               eru (0.120048)
               

               
               ecc (0.115035)

Expressed library(ies): 6 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cli (0.305623)
               

               
               cut (0.169924)
               

               
               fhi (0.169578)
               

               
               eli (0.151814)
               

               
               eru (0.120048)
               

               
               ecc (0.115035)

	7-815, gnl\|bosTau2\|chr4 (756142-755378)
	7-815, gnl\|Mm7\|chr5 (137781272-137782170)

	cli (0.305623)
	cut (0.169924)
	fhi (0.169578)
	eli (0.151814)
	eru (0.120048)
	ecc (0.115035)