Non-Coding RNA Search

Ss1.1-reru14c_o2.5

Sequence:


               
               AAAGATAACGTGTTTTTGGTAAAAGAAGTGCAAGGAACTAGAAGGGTGTGAAGAGCACAC
AGATGAGTAGGGGAAGTAGAAATGGTAACAACAAAGAAAAACGAGAGGAGGAAAAAAATG
GATAGAAATGAAAACAAGAAGGTATTTAATGCTACAGAGAGGAAGTGAGAAAGGCAAGGG
AATTAATTATAAAGGGAGAAGAGGGGCTAAAAGATTTAAACAAGGAGGCTAGAAAGGAAG
AGACGGTAGACGTGAGGCATTTCTCTTGTGCTTCAGCAGGTGGGCCGCTGTTGTCTCAGA
AGGATTAGCGAAGGCAGAGGGTGGGTATTCCATGCCTCTTCCGCCCGCATCAACCTGCGG
GCCTCAGTGCAAGGCAGTGACATCCTCCCCAAACCGACATAAATAATAACTTGTTCAAAT
TTGTTTTATTTTAGGCTGCCAAAAGAAACGAGTCATTAACAAGCATGAACCTAGAAAAGA
AAGCTCGTCTGCGAGAGGAAGCTGCTATGAAGGCCAAGACAGAGTAGCAGAGATACCCAT
GTTGGCTGGATTTTCAAACTCTAGAAACAGTTTTGCAGCAACAAGCCTATATTACAAAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAGATAACGTGTTTTTGGTAAAAGAAGTGCAAGGAACTAGAAGGGTGTGAAGAGCACAC
AGATGAGTAGGGGAAGTAGAAATGGTAACAACAAAGAAAAACGAGAGGAGGAAAAAAATG
GATAGAAATGAAAACAAGAAGGTATTTAATGCTACAGAGAGGAAGTGAGAAAGGCAAGGG
AATTAATTATAAAGGGAGAAGAGGGGCTAAAAGATTTAAACAAGGAGGCTAGAAAGGAAG
AGACGGTAGACGTGAGGCATTTCTCTTGTGCTTCAGCAGGTGGGCCGCTGTTGTCTCAGA
AGGATTAGCGAAGGCAGAGGGTGGGTATTCCATGCCTCTTCCGCCCGCATCAACCTGCGG
GCCTCAGTGCAAGGCAGTGACATCCTCCCCAAACCGACATAAATAATAACTTGTTCAAAT
TTGTTTTATTTTAGGCTGCCAAAAGAAACGAGTCATTAACAAGCATGAACCTAGAAAAGA
AAGCTCGTCTGCGAGAGGAAGCTGCTATGAAGGCCAAGACAGAGTAGCAGAGATACCCAT
GTTGGCTGGATTTTCAAACTCTAGAAACAGTTTTGCAGCAACAAGCCTATATTACAAAGA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               11-600, gnl|bosTau2|chr1 (34679935-34679335)
               

               
               11-600, gnl|Hg17|chr3 (123610827-123611438)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-600, gnl|bosTau2|chr1 (34679935-34679335)
               

               
               11-600, gnl|Hg17|chr3 (123610827-123611438)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               che (0.136314)
               

               
               eru (0.120048)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               che (0.136314)
               

               
               eru (0.120048)

	11-600, gnl\|bosTau2\|chr1 (34679935-34679335)
	11-600, gnl\|Hg17\|chr3 (123610827-123611438)