Ss1.1-reru15c_c1.5S
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GACCTGCAGCGGCAGAACGAGGAGCTGGAGATCAAGAACAACCACCTGAACCAGGCCATT CACGAGGAGCGCGAGGCCATCATCGAGCTGCGGGTGCAGCTGCGCCTCCTCCAGCTGCAG CGGGCCCGGCCCGAGCCCCTGCCCCCGGCCGGCGAGCCCGAGCCCAGCGCCGCCAAGGAG CAGCCCCTGGGAGGCAAGGAGCAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GACCTGCAGCGGCAGAACGAGGAGCTGGAGATCAAGAACAACCACCTGAACCAGGCCATT CACGAGGAGCGCGAGGCCATCATCGAGCTGCGGGTGCAGCTGCGCCTCCTCCAGCTGCAG CGGGCCCGGCCCGAGCCCCTGCCCCCGGCCGGCGAGCCCGAGCCCAGCGCCGCCAAGGAG CAGCCCCTGGGAGGCAAGGAGCAG |
| Aligned organism(s): 32 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
| 29-183, gnl|bosTau2|chr24 (31763970-31763807) | |
| 29-183, gnl|canFam2|chr7 (78555781-78555906) | |
| 29-183, gnl|canFam2|chr7 (78555766-78555903) | |
| 29-183, gnl|danRer3|chrNA (104553381-104553533) | |
| 29-183, gnl|danRer3|chrNA (104553357-104553516) | |
| 29-183, gnl|dasNov1|scaffold_42015 (2017-1906) | |
| 29-183, gnl|dasNov1|scaffold_42015 (2037-1899) | |
| 29-183, gnl|echTel1|scaffold_310727 (12423-12298) | |
| 29-183, gnl|echTel1|scaffold_310727 (12439-12301) | |
| 29-183, gnl|fr1|chrUn (131808448-131808283) | |
| 29-183, gnl|galGal2|chrUn (116488882-116489001) | |
| 29-183, gnl|galGal2|chrUn (116488879-116488998) | |
| 29-183, gnl|hg17|chr18 (9525654-9525792) | |
| 29-183, gnl|Hg17|chr18 (9525667-9525890) | |
| 29-183, gnl|hg17|chr3 (181525289-181525414) | |
| 29-183, gnl|loxAfr1|scaffold_46677 (3801-3693) | |
| 29-183, gnl|loxAfr1|scaffold_46677 (3817-3693) | |
| 29-183, gnl|mm7|chr17 (64067725-64067604) | |
| 29-183, gnl|mm7|chr17 (64067745-64067607) | |
| 29-183, gnl|Mm7|chr17 (64067730-64067528) | |
| 29-183, gnl|monDom2|scaffold_21 (23230390-23230265) | |
| 29-183, gnl|monDom2|scaffold_21 (23230406-23230268) | |
| 29-183, gnl|panTro1|chr17 (3134544-3134406) | |
| 29-183, gnl|panTro1|chr2 (185282955-185283080) | |
| 29-183, gnl|rheMac2|chr18 (4913722-4913584) | |
| 29-183, gnl|rheMac2|chr2 (106436738-106436604) | |
| 29-183, gnl|rn3|chr7 (723798-723676) | |
| 29-183, gnl|rn3|chr9 (104828692-104828554) | |
| 29-183, gnl|tetNig1|chr15_random (1752950-1753050) | |
| 29-183, gnl|tetNig1|chr15_random (1752931-1753086) | |
| 29-183, gnl|xenTro1|scaffold_333 (975165-975043) | |
| 29-183, gnl|xenTro1|scaffold_333 (975182-975046) |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 29-183, gnl|bosTau2|chr24 (31763970-31763807) | |
| 29-183, gnl|canFam2|chr7 (78555781-78555906) | |
| 29-183, gnl|canFam2|chr7 (78555766-78555903) | |
| 29-183, gnl|danRer3|chrNA (104553381-104553533) | |
| 29-183, gnl|danRer3|chrNA (104553357-104553516) | |
| 29-183, gnl|dasNov1|scaffold_42015 (2017-1906) | |
| 29-183, gnl|dasNov1|scaffold_42015 (2037-1899) | |
| 29-183, gnl|echTel1|scaffold_310727 (12423-12298) | |
| 29-183, gnl|echTel1|scaffold_310727 (12439-12301) | |
| 29-183, gnl|fr1|chrUn (131808448-131808283) | |
| 29-183, gnl|galGal2|chrUn (116488882-116489001) | |
| 29-183, gnl|galGal2|chrUn (116488879-116488998) | |
| 29-183, gnl|hg17|chr18 (9525654-9525792) | |
| 29-183, gnl|Hg17|chr18 (9525667-9525890) | |
| 29-183, gnl|hg17|chr3 (181525289-181525414) | |
| 29-183, gnl|loxAfr1|scaffold_46677 (3801-3693) | |
| 29-183, gnl|loxAfr1|scaffold_46677 (3817-3693) | |
| 29-183, gnl|mm7|chr17 (64067725-64067604) | |
| 29-183, gnl|mm7|chr17 (64067745-64067607) | |
| 29-183, gnl|Mm7|chr17 (64067730-64067528) | |
| 29-183, gnl|monDom2|scaffold_21 (23230390-23230265) | |
| 29-183, gnl|monDom2|scaffold_21 (23230406-23230268) | |
| 29-183, gnl|panTro1|chr17 (3134544-3134406) | |
| 29-183, gnl|panTro1|chr2 (185282955-185283080) | |
| 29-183, gnl|rheMac2|chr18 (4913722-4913584) | |
| 29-183, gnl|rheMac2|chr2 (106436738-106436604) | |
| 29-183, gnl|rn3|chr7 (723798-723676) | |
| 29-183, gnl|rn3|chr9 (104828692-104828554) | |
| 29-183, gnl|tetNig1|chr15_random (1752950-1753050) | |
| 29-183, gnl|tetNig1|chr15_random (1752931-1753086) | |
| 29-183, gnl|xenTro1|scaffold_333 (975165-975043) | |
| 29-183, gnl|xenTro1|scaffold_333 (975182-975046) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| cmu (0.186393) | |
| eru (0.120048) |