Non-Coding RNA Search

Ss1.1-reru19c_k23.5

Sequence:


               
               CTGCAGGAATTCGGCACGGGCTCCAGCGGGGCTCGCAGCAGGCTGGGGCCGGTCTGGACA
ATGCAGGCCTGGGCTCCCCGGCCCTGCACGCAGCTGGGCTGGTGTGGCAAGGACAGAGAG
TCACAGAATCTGTTAGGATAACCCCTGCAGGGGAAATAGACCCACTGTACTAGTAAATGA
TTCTGGGGATTGAAATGGGAGGAGCAGTTTGCTCTTGTTTTGATGGTCAGAGGTACACAA
AGCAGGGTTACTGCCTCCCCTGTTTGGAAACACTATGTCTTAGGCTGCGTTCTTTTTTCC
CCAAAGAGGACGCAGGAATAAGCAAACTGAACTCTGTGCCACAGGGAAAGAGAGGAGCGG
ACAAGGCTCCATGGCTGCAGGTTATACGACGTGGCTCGTCGTTAGAAACCAAGGCTGAAG
TCAGATCGCATGTTTCAGCCCAGCTGGGTTACAAGGAAGGAGAGGAAAATCCTTTCTCCG
CCCCTGGGTTTGGGAACCGGGAGGCCAAAAGGAATGGAGCTGGGGAAGGGGAGCGGAATC
ACAGTTCACACAAACATCGTGAGAGTCTGGTAGTAAAGACAGAGATTAAGTAAAACAGGT
TTTACTGTTGCGCTGCGTTCAGTTCCTACGAGATGTACATAAAGTGTTGGTCCTTTGAGA
TGGACATGCTTGATCCGTGTGGTGGGAAACGAGAGTTACTGTACACAAGCACTGGCAAGC
TCTTTATAGACCCCTATTTCTTTAAAGCAAATTCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTGCAGGAATTCGGCACGGGCTCCAGCGGGGCTCGCAGCAGGCTGGGGCCGGTCTGGACA
ATGCAGGCCTGGGCTCCCCGGCCCTGCACGCAGCTGGGCTGGTGTGGCAAGGACAGAGAG
TCACAGAATCTGTTAGGATAACCCCTGCAGGGGAAATAGACCCACTGTACTAGTAAATGA
TTCTGGGGATTGAAATGGGAGGAGCAGTTTGCTCTTGTTTTGATGGTCAGAGGTACACAA
AGCAGGGTTACTGCCTCCCCTGTTTGGAAACACTATGTCTTAGGCTGCGTTCTTTTTTCC
CCAAAGAGGACGCAGGAATAAGCAAACTGAACTCTGTGCCACAGGGAAAGAGAGGAGCGG
ACAAGGCTCCATGGCTGCAGGTTATACGACGTGGCTCGTCGTTAGAAACCAAGGCTGAAG
TCAGATCGCATGTTTCAGCCCAGCTGGGTTACAAGGAAGGAGAGGAAAATCCTTTCTCCG
CCCCTGGGTTTGGGAACCGGGAGGCCAAAAGGAATGGAGCTGGGGAAGGGGAGCGGAATC
ACAGTTCACACAAACATCGTGAGAGTCTGGTAGTAAAGACAGAGATTAAGTAAAACAGGT
TTTACTGTTGCGCTGCGTTCAGTTCCTACGAGATGTACATAAAGTGTTGGTCCTTTGAGA
TGGACATGCTTGATCCGTGTGGTGGGAAACGAGAGTTACTGTACACAAGCACTGGCAAGC
TCTTTATAGACCCCTATTTCTTTAAAGCAAATTCAG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               28-756, gnl|bosTau2|chr13 (16302907-16303664)
               

               
               28-756, gnl|Hg17|chr10 (13727095-13726292)
               

               
               28-756, gnl|Mm7|chr2 (4530044-4530767)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               28-756, gnl|bosTau2|chr13 (16302907-16303664)
               

               
               28-756, gnl|Hg17|chr10 (13727095-13726292)
               

               
               28-756, gnl|Mm7|chr2 (4530044-4530767)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               che (0.136314)
               

               
               eru (0.120048)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               che (0.136314)
               

               
               eru (0.120048)

	28-756, gnl\|bosTau2\|chr13 (16302907-16303664)
	28-756, gnl\|Hg17\|chr10 (13727095-13726292)
	28-756, gnl\|Mm7\|chr2 (4530044-4530767)