Ss1.1-reru21c_b5.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTAAGTATTAATATTACCAGGTGAGCACTCAGTAAATAGTAGCTGTTGCTTACTCTTATT ATGTTCATGAATGTTTTTCTCCCAGCTCTCAAAGAAACTGAAGGAGGCTGTCCAGATACC ACTTTCATTGAAGATGCAGTTCATGTGCTCTTAAAAACTCGACGTATTCTCAAGTGTTCT TACCCATATGGATTTTTCTTAGAACCTAAAAGCACAAAGAAAGAAATTTTTGAACTCATG CAAACAGACCTAGAAATGGTCACTGAAGACCTTGCCCAAAAAGTCAATAGGCCTTACCTT CGCACTCCCCGCCACAAGATCATCAAGGCAGCCTGCCTTGTACAGCAAAAGAGGCAGGAG TTCCTGGCATCTGTGGCTCGGGGAGTTGCTCCTGCAGACTCACCAGAAGCTCCAAGACGC AGCTTTGCTGGTGGAACGTGGGATTGGGAATATTTAGGATTTGCATCACCTGAGGAATAT GCTGAATTTCAGTATCGGAGGAGGCACAGACAACAACGCCGTCGAGGAGATGTGCACAGT CTGCTTAGTAATCCTCCAGACCCTGATGAGCCAAGCGAAAGCACTTTAGATATTCCAGAA GGTAGCGGTGGCCGCAGGCCTGGCGCCTCCGTGGTAAGTTCTGCGTCCATGAGCGCACTG CACAGCTCCTCCCTGCGTGATTACACCCCCGCCAGTCGCTCTGAGAACCAAGACTCTCTT CAGGTAGCCTTCCTGTGCAGTCATTGCTCCTGCTCTTGCTCTTTCCCTGTTTTGCCTGGC TTCCTGTTTTTACGTCTGGTACTTTCCGTTTTCTTCCTTCCATTGTAAAATCTTTTTTTC AGTGATGTATTATCATCTGGAATA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTAAGTATTAATATTACCAGGTGAGCACTCAGTAAATAGTAGCTGTTGCTTACTCTTATT ATGTTCATGAATGTTTTTCTCCCAGCTCTCAAAGAAACTGAAGGAGGCTGTCCAGATACC ACTTTCATTGAAGATGCAGTTCATGTGCTCTTAAAAACTCGACGTATTCTCAAGTGTTCT TACCCATATGGATTTTTCTTAGAACCTAAAAGCACAAAGAAAGAAATTTTTGAACTCATG CAAACAGACCTAGAAATGGTCACTGAAGACCTTGCCCAAAAAGTCAATAGGCCTTACCTT CGCACTCCCCGCCACAAGATCATCAAGGCAGCCTGCCTTGTACAGCAAAAGAGGCAGGAG TTCCTGGCATCTGTGGCTCGGGGAGTTGCTCCTGCAGACTCACCAGAAGCTCCAAGACGC AGCTTTGCTGGTGGAACGTGGGATTGGGAATATTTAGGATTTGCATCACCTGAGGAATAT GCTGAATTTCAGTATCGGAGGAGGCACAGACAACAACGCCGTCGAGGAGATGTGCACAGT CTGCTTAGTAATCCTCCAGACCCTGATGAGCCAAGCGAAAGCACTTTAGATATTCCAGAA GGTAGCGGTGGCCGCAGGCCTGGCGCCTCCGTGGTAAGTTCTGCGTCCATGAGCGCACTG CACAGCTCCTCCCTGCGTGATTACACCCCCGCCAGTCGCTCTGAGAACCAAGACTCTCTT CAGGTAGCCTTCCTGTGCAGTCATTGCTCCTGCTCTTGCTCTTTCCCTGTTTTGCCTGGC TTCCTGTTTTTACGTCTGGTACTTTCCGTTTTCTTCCTTCCATTGTAAAATCTTTTTTTC AGTGATGTATTATCATCTGGAATA |
| Aligned organism(s): 40 entry(ies) | More info |
| Aligned organism(s): 40 entry(ies) | Help | Less info |
| 98-243, gnl|bosTau2|chr4 (1285484-1285629) | |
| 98-243, gnl|canFam2|chr14 (20942099-20942276) | |
| 98-243, gnl|danRer3|chr19 (70388253-70388073) | |
| 98-243, gnl|dasNov1|scaffold_35733 (2932-2745) | |
| 98-243, gnl|fr1|chrUn (27569039-27569199) | |
| 98-243, gnl|galGal2|chr2 (21915603-21915793) | |
| 98-243, gnl|hg17|chr7 (91663926-91664099) | |
| 98-243, gnl|Hg17|chr7 (91663936-91664081) | |
| 98-243, gnl|loxAfr1|scaffold_1827 (81180-81002) | |
| 98-243, gnl|mm7|chr5 (3709055-3708884) | |
| 98-243, gnl|Mm7|chr5 (3709043-3708898) | |
| 98-243, gnl|monDom2|scaffold_7 (60324592-60324770) | |
| 98-243, gnl|oryCun1|scaffold_183286 (4904-4727) | |
| 98-243, gnl|panTro1|chr6 (93221326-93221500) | |
| 98-243, gnl|rheMac2|chr3 (124872152-124871978) | |
| 98-243, gnl|rn3|chr4 (27176546-27176717) | |
| 98-243, gnl|tetNig1|chr8 (3721109-3720963) | |
| 98-243, gnl|xenTro1|scaffold_182 (87160-86976) | |
| 244-422, gnl|bosTau2|chr4 (1286621-1286799) | |
| 244-422, gnl|canFam2|chr14 (20943227-20943464) | |
| 244-422, gnl|danRer3|chr19 (70387515-70387309) | |
| 244-422, gnl|dasNov1|scaffold_22140 (51434-51203) | |
| 244-422, gnl|echTel1|scaffold_319861 (6960-7204) | |
| 244-422, gnl|fr1|chrUn (27569277-27569463) | |
| 244-422, gnl|galGal2|chr2 (21916959-21917200) | |
| 244-422, gnl|hg17|chr7 (91665104-91665337) | |
| 244-422, gnl|Hg17|chr7 (91665131-91665309) | |
| 244-422, gnl|loxAfr1|scaffold_1827 (80016-79783) | |
| 244-422, gnl|mm7|chr5 (3708016-3707785) | |
| 244-422, gnl|Mm7|chr5 (3707989-3707811) | |
| 244-422, gnl|monDom2|scaffold_7 (60326111-60326345) | |
| 244-422, gnl|oryCun1|scaffold_183286 (3136-2898) | |
| 244-422, gnl|panTro1|chr6 (93222505-93222740) | |
| 244-422, gnl|rheMac2|chr3 (124870973-124870742) | |
| 244-422, gnl|rn3|chr4 (27177586-27177817) | |
| 244-422, gnl|tetNig1|chr8 (3720901-3720699) | |
| 244-422, gnl|xenTro1|scaffold_182 (86866-86657) | |
| 588-852, gnl|bosTau2|chr4 (1293885-1294152) | |
| 588-852, gnl|Hg17|chr7 (91671686-91671955) | |
| 588-852, gnl|Mm7|chr5 (3699913-3699658) |
| Aligned organism(s): 40 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 98-243, gnl|bosTau2|chr4 (1285484-1285629) | |
| 98-243, gnl|canFam2|chr14 (20942099-20942276) | |
| 98-243, gnl|danRer3|chr19 (70388253-70388073) | |
| 98-243, gnl|dasNov1|scaffold_35733 (2932-2745) | |
| 98-243, gnl|fr1|chrUn (27569039-27569199) | |
| 98-243, gnl|galGal2|chr2 (21915603-21915793) | |
| 98-243, gnl|hg17|chr7 (91663926-91664099) | |
| 98-243, gnl|Hg17|chr7 (91663936-91664081) | |
| 98-243, gnl|loxAfr1|scaffold_1827 (81180-81002) | |
| 98-243, gnl|mm7|chr5 (3709055-3708884) | |
| 98-243, gnl|Mm7|chr5 (3709043-3708898) | |
| 98-243, gnl|monDom2|scaffold_7 (60324592-60324770) | |
| 98-243, gnl|oryCun1|scaffold_183286 (4904-4727) | |
| 98-243, gnl|panTro1|chr6 (93221326-93221500) | |
| 98-243, gnl|rheMac2|chr3 (124872152-124871978) | |
| 98-243, gnl|rn3|chr4 (27176546-27176717) | |
| 98-243, gnl|tetNig1|chr8 (3721109-3720963) | |
| 98-243, gnl|xenTro1|scaffold_182 (87160-86976) | |
| 244-422, gnl|bosTau2|chr4 (1286621-1286799) | |
| 244-422, gnl|canFam2|chr14 (20943227-20943464) | |
| 244-422, gnl|danRer3|chr19 (70387515-70387309) | |
| 244-422, gnl|dasNov1|scaffold_22140 (51434-51203) | |
| 244-422, gnl|echTel1|scaffold_319861 (6960-7204) | |
| 244-422, gnl|fr1|chrUn (27569277-27569463) | |
| 244-422, gnl|galGal2|chr2 (21916959-21917200) | |
| 244-422, gnl|hg17|chr7 (91665104-91665337) | |
| 244-422, gnl|Hg17|chr7 (91665131-91665309) | |
| 244-422, gnl|loxAfr1|scaffold_1827 (80016-79783) | |
| 244-422, gnl|mm7|chr5 (3708016-3707785) | |
| 244-422, gnl|Mm7|chr5 (3707989-3707811) | |
| 244-422, gnl|monDom2|scaffold_7 (60326111-60326345) | |
| 244-422, gnl|oryCun1|scaffold_183286 (3136-2898) | |
| 244-422, gnl|panTro1|chr6 (93222505-93222740) | |
| 244-422, gnl|rheMac2|chr3 (124870973-124870742) | |
| 244-422, gnl|rn3|chr4 (27177586-27177817) | |
| 244-422, gnl|tetNig1|chr8 (3720901-3720699) | |
| 244-422, gnl|xenTro1|scaffold_182 (86866-86657) | |
| 588-852, gnl|bosTau2|chr4 (1293885-1294152) | |
| 588-852, gnl|Hg17|chr7 (91671686-91671955) | |
| 588-852, gnl|Mm7|chr5 (3699913-3699658) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eru (0.240096) |