Non-Coding RNA Search

Ss1.1-reru22c_p17.5

Sequence:


               
               CCGCGGTTCCCGGTTGGAGGCGCACTGGGACCCGGACGCGTCGGGGGTGTGGCCGCTGCC
ACCTGCAGCCTGGACCGCGAGTCTGGTCCCAGGCGCCGCCGCAGCCGCTGCCGGTGAGGC
CGACCAGCTTATTTTAAGAAGAAAACCAACTGGAAAAAAAATGAAGTTCCTTCTCTTCAT
ATTTGTTGGTGGTGTTCACCTTTTATCTCTGAACTCTGGGAAAGCTATTTATGGAAATGG
CAACCGTCAGAGGACTTTTCAAGAAATAAAAGAAGAAATAGCCTGCTATGGAGATGTTGC
TAAGGCAATCATCAACCTTGCTGTTTATGGTAAAGCCCAGAACAGATCCTATGAGAGACT
GGCACTTCTGGTTGATACAGTTGGACCCAGACCAAGTGGCTCCAAGAACCTAGAAAAAGC
CATCCAAATCATGCACCAAAACCTACAGGAGGATGGGCTGGAGAATGTCCACCTGGAGCC
TGTCAAAATACCCCACTGGGAAAGGGGAGAAGAATCTGCTGTGATGCTGGAGCCGAGAGA
GCACAAGATGGCTATTTTGGGTCTTGGCAGCAGCATTGGGACGCCCCCGGAAGGGATTAC
AGCAGAAGTTCTGGTGGTGACCTCTTTCGATGAACT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCGCGGTTCCCGGTTGGAGGCGCACTGGGACCCGGACGCGTCGGGGGTGTGGCCGCTGCC
ACCTGCAGCCTGGACCGCGAGTCTGGTCCCAGGCGCCGCCGCAGCCGCTGCCGGTGAGGC
CGACCAGCTTATTTTAAGAAGAAAACCAACTGGAAAAAAAATGAAGTTCCTTCTCTTCAT
ATTTGTTGGTGGTGTTCACCTTTTATCTCTGAACTCTGGGAAAGCTATTTATGGAAATGG
CAACCGTCAGAGGACTTTTCAAGAAATAAAAGAAGAAATAGCCTGCTATGGAGATGTTGC
TAAGGCAATCATCAACCTTGCTGTTTATGGTAAAGCCCAGAACAGATCCTATGAGAGACT
GGCACTTCTGGTTGATACAGTTGGACCCAGACCAAGTGGCTCCAAGAACCTAGAAAAAGC
CATCCAAATCATGCACCAAAACCTACAGGAGGATGGGCTGGAGAATGTCCACCTGGAGCC
TGTCAAAATACCCCACTGGGAAAGGGGAGAAGAATCTGCTGTGATGCTGGAGCCGAGAGA
GCACAAGATGGCTATTTTGGGTCTTGGCAGCAGCATTGGGACGCCCCCGGAAGGGATTAC
AGCAGAAGTTCTGGTGGTGACCTCTTTCGATGAACT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61888430|ref|XP_588895.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61888430|ref|XP_588895.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               125-597, gnl|bosTau2|chr14 (41675850-41675378)
               

               
               125-597, gnl|Hg17|chr8 (97866265-97866738)
               

               
               125-597, gnl|Mm7|chr15 (33321430-33321889)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               125-597, gnl|bosTau2|chr14 (41675850-41675378)
               

               
               125-597, gnl|Hg17|chr8 (97866265-97866738)
               

               
               125-597, gnl|Mm7|chr15 (33321430-33321889)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eru (0.120048)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eru (0.120048)

	125-597, gnl\|bosTau2\|chr14 (41675850-41675378)
	125-597, gnl\|Hg17\|chr8 (97866265-97866738)
	125-597, gnl\|Mm7\|chr15 (33321430-33321889)