Ss1.1-reru26c_b18.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGTGTCAGCCTTGCCAGTGTCACCACAACATTGACACGACGGACCCGGAAGCCTGTGACA AGGAGACTGGGAGGTGCCTCAAGTGCCTATACCACACCGAGGGGGTGCACTGCCAGCTCT GCCGACTTGGTTACTATGGCGACGCTCTCCAGCAGGACTGTCGAAAGTGTGTCTGCAATT ACCTGGGCACCGTGCAGGAGCATTGTAACGGCTCTGACTGCCAATGTGACAAAACCACCG GGCAGTGCTTGTGTCTCCCTAACGTGATCGGCCAGAACTGTGACCGCTGTGCGCCCAACA CCTGGCAGCTGGCCAGCGGGACAGGGTGTGAGCCATGCAACTGCGATGCTGCTCATTCCT TTGGGCCTTCTTGTAATGAGTTCACAGGGCAGTGCCAGTGCATGCCTGGCTTCGGAGGCC GCACCTGCAGCGAGTGCCAGGAGCTCTTCTGGGGAGACCCCAGCGTGGAGTGCCGAGCCT GTGACTGCGACCCCAGGGGCATCGAGACGCCGCAGTGTGACCAGTCCACCGGCCAGTGTG TCTGCGTCGAGGGTGTGGAGGGTCCCCGCTGCGACAAGTGCACTCGAGGGTACTCGGGGG TCTTCCCCGACT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGTGTCAGCCTTGCCAGTGTCACCACAACATTGACACGACGGACCCGGAAGCCTGTGACA AGGAGACTGGGAGGTGCCTCAAGTGCCTATACCACACCGAGGGGGTGCACTGCCAGCTCT GCCGACTTGGTTACTATGGCGACGCTCTCCAGCAGGACTGTCGAAAGTGTGTCTGCAATT ACCTGGGCACCGTGCAGGAGCATTGTAACGGCTCTGACTGCCAATGTGACAAAACCACCG GGCAGTGCTTGTGTCTCCCTAACGTGATCGGCCAGAACTGTGACCGCTGTGCGCCCAACA CCTGGCAGCTGGCCAGCGGGACAGGGTGTGAGCCATGCAACTGCGATGCTGCTCATTCCT TTGGGCCTTCTTGTAATGAGTTCACAGGGCAGTGCCAGTGCATGCCTGGCTTCGGAGGCC GCACCTGCAGCGAGTGCCAGGAGCTCTTCTGGGGAGACCCCAGCGTGGAGTGCCGAGCCT GTGACTGCGACCCCAGGGGCATCGAGACGCCGCAGTGTGACCAGTCCACCGGCCAGTGTG TCTGCGTCGAGGGTGTGGAGGGTCCCCGCTGCGACAAGTGCACTCGAGGGTACTCGGGGG TCTTCCCCGACT |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 3-163, gnl|bosTau2|chr4 (20154039-20154199) | |
| 3-163, gnl|Hg17|chr7 (107188088-107187928) | |
| 3-163, gnl|Mm7|chr12 (29146277-29146437) | |
| 166-380, gnl|bosTau2|chr4 (20155717-20155931) | |
| 166-380, gnl|Hg17|chr7 (107186619-107186405) | |
| 166-380, gnl|Mm7|chr12 (29147423-29147637) | |
| 476-612, gnl|bosTau2|chr4 (20165821-20165957) | |
| 476-612, gnl|canFam2|chr18 (15670254-15670124) | |
| 476-612, gnl|danRer3|chr23 (22038353-22038223) | |
| 476-612, gnl|dasNov1|scaffold_35614 (1919-1799) | |
| 476-612, gnl|echTel1|scaffold_320415 (69627-69495) | |
| 476-612, gnl|fr1|chrUn (264950462-264950592) | |
| 476-612, gnl|galGal2|chr1 (8808828-8808698) | |
| 476-612, gnl|hg17|chr7 (107174577-107174707) | |
| 476-612, gnl|Hg17|chr7 (107174756-107174620) | |
| 476-612, gnl|loxAfr1|scaffold_593 (164525-164645) | |
| 476-612, gnl|mm7|chr12 (29158989-29158859) | |
| 476-612, gnl|Mm7|chr12 (29158808-29158944) | |
| 476-612, gnl|monDom2|scaffold_22 (44592657-44592527) | |
| 476-612, gnl|oryCun1|scaffold_212465 (92637-92507) | |
| 476-612, gnl|panTro1|chr6 (109090842-109090972) | |
| 476-612, gnl|rheMac2|chr3 (145349845-145349975) | |
| 476-612, gnl|rn3|chr6 (49174279-49174149) | |
| 476-612, gnl|tetNig1|chr13 (11445264-11445394) | |
| 476-612, gnl|xenTro1|scaffold_452 (844436-844566) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 3-163, gnl|bosTau2|chr4 (20154039-20154199) | |
| 3-163, gnl|Hg17|chr7 (107188088-107187928) | |
| 3-163, gnl|Mm7|chr12 (29146277-29146437) | |
| 166-380, gnl|bosTau2|chr4 (20155717-20155931) | |
| 166-380, gnl|Hg17|chr7 (107186619-107186405) | |
| 166-380, gnl|Mm7|chr12 (29147423-29147637) | |
| 476-612, gnl|bosTau2|chr4 (20165821-20165957) | |
| 476-612, gnl|canFam2|chr18 (15670254-15670124) | |
| 476-612, gnl|danRer3|chr23 (22038353-22038223) | |
| 476-612, gnl|dasNov1|scaffold_35614 (1919-1799) | |
| 476-612, gnl|echTel1|scaffold_320415 (69627-69495) | |
| 476-612, gnl|fr1|chrUn (264950462-264950592) | |
| 476-612, gnl|galGal2|chr1 (8808828-8808698) | |
| 476-612, gnl|hg17|chr7 (107174577-107174707) | |
| 476-612, gnl|Hg17|chr7 (107174756-107174620) | |
| 476-612, gnl|loxAfr1|scaffold_593 (164525-164645) | |
| 476-612, gnl|mm7|chr12 (29158989-29158859) | |
| 476-612, gnl|Mm7|chr12 (29158808-29158944) | |
| 476-612, gnl|monDom2|scaffold_22 (44592657-44592527) | |
| 476-612, gnl|oryCun1|scaffold_212465 (92637-92507) | |
| 476-612, gnl|panTro1|chr6 (109090842-109090972) | |
| 476-612, gnl|rheMac2|chr3 (145349845-145349975) | |
| 476-612, gnl|rn3|chr6 (49174279-49174149) | |
| 476-612, gnl|tetNig1|chr13 (11445264-11445394) | |
| 476-612, gnl|xenTro1|scaffold_452 (844436-844566) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eru (0.240096) |