Non-Coding RNA Search

Ss1.1-reru26c_e2.5

Sequence:


               
               CTCACTGCACACCCCGCCCTGCCCTCTGGGCGGCGGGTTGGGGTCCTGAGAGGGAACGAG
CCTTGCTCTTCTGTATATAGAGTCGAGCCACTCCTGCTCAGGAAAACCTAGTCGCTTGTC
GTTGCCCTTGTGACATTTTTGTACACTGGTTTGCTACTCGTGGCACGAAACAAACAAAAC
AGAGGCGTTTTTCAAGCCAAGCTGTTGTTTTGGAAACCCGCTTTCTTTCAGTGTCCGTTT
TGTATTATATTTGGAAGAATTCTTCATTTCTCTTGGTGTCATTGTGGTAGACAGGATAGG
ATAGTCTGACTTGTGATTCTTTCTGCCAGGAAAATGGCAGTGCCTCTGTCATTCCCCCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCACTGCACACCCCGCCCTGCCCTCTGGGCGGCGGGTTGGGGTCCTGAGAGGGAACGAG
CCTTGCTCTTCTGTATATAGAGTCGAGCCACTCCTGCTCAGGAAAACCTAGTCGCTTGTC
GTTGCCCTTGTGACATTTTTGTACACTGGTTTGCTACTCGTGGCACGAAACAAACAAAAC
AGAGGCGTTTTTCAAGCCAAGCTGTTGTTTTGGAAACCCGCTTTCTTTCAGTGTCCGTTT
TGTATTATATTTGGAAGAATTCTTCATTTCTCTTGGTGTCATTGTGGTAGACAGGATAGG
ATAGTCTGACTTGTGATTCTTTCTGCCAGGAAAATGGCAGTGCCTCTGTCATTCCCCCCA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-360, gnl|bosTau2|chrX (18760289-18760646)
               

               
               1-360, gnl|Hg17|chrX (109226357-109226732)
               

               
               1-360, gnl|Mm7|chrX (137501952-137502322)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-360, gnl|bosTau2|chrX (18760289-18760646)
               

               
               1-360, gnl|Hg17|chrX (109226357-109226732)
               

               
               1-360, gnl|Mm7|chrX (137501952-137502322)

Expressed library(ies): 5 entry(ies)

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Expressed library(ies): 5 entry(ies)

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               hea (0.408998)
               

               
               ece (0.229305)
               

               
               col (0.195008)
               

               
               nco (0.161734)
               

               
               eru (0.120048)

Expressed library(ies): 5 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hea (0.408998)
               

               
               ece (0.229305)
               

               
               col (0.195008)
               

               
               nco (0.161734)
               

               
               eru (0.120048)

	1-360, gnl\|bosTau2\|chrX (18760289-18760646)
	1-360, gnl\|Hg17\|chrX (109226357-109226732)
	1-360, gnl\|Mm7\|chrX (137501952-137502322)

	hea (0.408998)
	ece (0.229305)
	col (0.195008)
	nco (0.161734)
	eru (0.120048)