Non-Coding RNA Search

Ss1.1-reru27c_b15.5

Sequence:


               
               GGCAGCCCCTGCGGGGCCCACCCAAGGCTTCGGCCGGTGGGCGAGGGAGTCCCGACGGCG
GGGACCCGGGCCTTCCTCCTCGCACGTCGGTGGGAGCGCTCAGGTCCGGCTCAGGCTTGA
CCCCTGGGCTCAGAGGTCCGTGGCACAGATCCAAACACACAGCCCGATCACGTGGAATGA
CACTTTTCATTGGTGTTAGTTGGGGGAAGAGGTTAATGGTTACAGAGCTGGGGCTTGGGC
CCACCAGGTCAGGCTCCCAGCCCTGAGGTGGCCAGTGGGTGCTCTTGCTGTGGTCCCAAG
CCCCTCCCCCACTGCGTCCTCTCAGGCGGTTATAGATAGAATAAATTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCAGCCCCTGCGGGGCCCACCCAAGGCTTCGGCCGGTGGGCGAGGGAGTCCCGACGGCG
GGGACCCGGGCCTTCCTCCTCGCACGTCGGTGGGAGCGCTCAGGTCCGGCTCAGGCTTGA
CCCCTGGGCTCAGAGGTCCGTGGCACAGATCCAAACACACAGCCCGATCACGTGGAATGA
CACTTTTCATTGGTGTTAGTTGGGGGAAGAGGTTAATGGTTACAGAGCTGGGGCTTGGGC
CCACCAGGTCAGGCTCCCAGCCCTGAGGTGGCCAGTGGGTGCTCTTGCTGTGGTCCCAAG
CCCCTCCCCCACTGCGTCCTCTCAGGCGGTTATAGATAGAATAAATTC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-348, gnl|bosTau2|chr19 (51580357-51579996)
               

               
               1-348, gnl|Hg17|chr17 (71007785-71008115)
               

               
               1-348, gnl|Mm7|chr11 (115908098-115908399)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-348, gnl|bosTau2|chr19 (51580357-51579996)
               

               
               1-348, gnl|Hg17|chr17 (71007785-71008115)
               

               
               1-348, gnl|Mm7|chr11 (115908098-115908399)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               fce (0.543183)
               

               
               fty (0.17584)
               

               
               eru (0.120048)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fce (0.543183)
               

               
               fty (0.17584)
               

               
               eru (0.120048)

	1-348, gnl\|bosTau2\|chr19 (51580357-51579996)
	1-348, gnl\|Hg17\|chr17 (71007785-71008115)
	1-348, gnl\|Mm7\|chr11 (115908098-115908399)