Non-Coding RNA Search

Ss1.1-reru27c_b22.5

Sequence:


               
               GCGGCTCGAGATACCTGGAAGCCAAATCCATGAAAGAACAAATATATTCAAACTTTGGTA
ACTACTGTAAATCGCTTCAAATGAATAACTTATTCAAAACTTTGGCCAGGAATTTATTTA
GATATGCCTTGTCTAGATGTTTTTTTAATACTATTAAAAAGTCATGTCATTTTGTTGGCT
TGATGAGACAGCTTCATTACCAAGATTCTTAATAATAACTTTCATACAAGATAGAGTTAA
AATCAAGAAAACCCTTTTGGTAGATCAATTACAGACTTTTTAAAAAATATTTCCATTCTA
GAGTTCTCTTATGGCACAGTGGATTAAGGACCAGTGTTGTTGCTACTTTGGTGCAGGGGG
TTCAGTTCCTGGCCCGGAAACTTTCACATGCCCCAGGTGCTCCACTCTTTCCCCCCTGCC
CTTACACCAAAAAAATAAAAAGAAAATGAAATATTTCCACTTTAAAAAACAAAATGAGTG
AAAATATGGAATGTTGTCTTGTATTACTTTATCCTTAGTTTATATTTTGATTAGAGCATT
TTGTTTTTCTGTATTGGCTAGAAATGAAGCAAGGGCAAAATAATCTGATAAAAATCCGTT
TATTTGGCTGTTACTTCTTAGATGACCAGAATCAGAGGCGTTTTTAAGTGAAAATGCCTA
AAAACAATGTAAACACTTTTAACATTTCTTTGAAAGTCACTTTTGCTATTGTAACTAATG
TATTGAATTCATGTACCAATAGCCTTATTTTGAGTTTCTTTAACAGATGAAAGAAGAAAG
CCAGAGTTCAATACTTTCACTGTTGCCTCCTGCTTATCGCAAGCCATCAATAGCACTGCC
TCCAGTGTCACCTTGGACTGAGCCGGAATGTGATTTTCCTGATGAAAAAGACTTAAACTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGCTCGAGATACCTGGAAGCCAAATCCATGAAAGAACAAATATATTCAAACTTTGGTA
ACTACTGTAAATCGCTTCAAATGAATAACTTATTCAAAACTTTGGCCAGGAATTTATTTA
GATATGCCTTGTCTAGATGTTTTTTTAATACTATTAAAAAGTCATGTCATTTTGTTGGCT
TGATGAGACAGCTTCATTACCAAGATTCTTAATAATAACTTTCATACAAGATAGAGTTAA
AATCAAGAAAACCCTTTTGGTAGATCAATTACAGACTTTTTAAAAAATATTTCCATTCTA
GAGTTCTCTTATGGCACAGTGGATTAAGGACCAGTGTTGTTGCTACTTTGGTGCAGGGGG
TTCAGTTCCTGGCCCGGAAACTTTCACATGCCCCAGGTGCTCCACTCTTTCCCCCCTGCC
CTTACACCAAAAAAATAAAAAGAAAATGAAATATTTCCACTTTAAAAAACAAAATGAGTG
AAAATATGGAATGTTGTCTTGTATTACTTTATCCTTAGTTTATATTTTGATTAGAGCATT
TTGTTTTTCTGTATTGGCTAGAAATGAAGCAAGGGCAAAATAATCTGATAAAAATCCGTT
TATTTGGCTGTTACTTCTTAGATGACCAGAATCAGAGGCGTTTTTAAGTGAAAATGCCTA
AAAACAATGTAAACACTTTTAACATTTCTTTGAAAGTCACTTTTGCTATTGTAACTAATG
TATTGAATTCATGTACCAATAGCCTTATTTTGAGTTTCTTTAACAGATGAAAGAAGAAAG
CCAGAGTTCAATACTTTCACTGTTGCCTCCTGCTTATCGCAAGCCATCAATAGCACTGCC
TCCAGTGTCACCTTGGACTGAGCCGGAATGTGATTTTCCTGATGAAAAAGACTTAAACTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               481-900, gnl|bosTau2|chr2 (52594642-52595073)
               

               
               481-900, gnl|Hg17|chr2 (202169951-202170394)
               

               
               481-900, gnl|Mm7|chr1 (59245079-59245584)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               481-900, gnl|bosTau2|chr2 (52594642-52595073)
               

               
               481-900, gnl|Hg17|chr2 (202169951-202170394)
               

               
               481-900, gnl|Mm7|chr1 (59245079-59245584)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eru (0.120048)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eru (0.120048)

	481-900, gnl\|bosTau2\|chr2 (52594642-52595073)
	481-900, gnl\|Hg17\|chr2 (202169951-202170394)
	481-900, gnl\|Mm7\|chr1 (59245079-59245584)