Ss1.1-reru27c_j2.5
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ATTGGCAGGACCCTGTGTCTTACCCCTCCCTCTGGCCTGGGGGCCACTCTGGTTCTGCCA
AGGTTGCTCGCCCACCCCCGCTGCTCTGACAGCTGCTGCCTGACTTGGGGTCTCCGCCCT
TCCTCTCTGTGCCCTCTGCCCCAGGGGGGACACCTGCATGTACTGGGGGTGGGCAGCCGG
GCCAGCCATAGAGGGAGGAGCCCCTCTGCCACCTGCTTTGTGCCTCTGAAGCTCCCCCTC
CTTGCTCAAGGCCTCAGACCAGCCATCCTCTGTGGAGCACCCCCATCCCAGCTGAACCAA
ACCCGAACTCGGGGGGCCAGGCCAGACTGCCCCACAGGACCCTGGGGTTGTGACACGGAG
GGGCAGTGGATAAACCTAATCCAAAGGTGAGCCAGGACTGGTCACGGACCCCGCCTCCTG
TGCCATGTACTCCCGGAGCCGCGTTAGACATAGTCCAAGCTTTGCCGAGAAAATAAATGT
ATTACTATATTTGACGACATAAAATCTATATATTTTTCACCATTGGAATCTAGTCAAGCT
GCGTAGCTCCTCTGCTCCTGTCCGCGTCTTGCTGTCTGTGGCCTTCCTACTGTGTCTTAT
GTTTTGGTGGACGTGATCAGCCTGGGGCTGTGTGCTCTGCTCTGTCCCTGTGGCCAGAGG
AGCCACGCGTGAAGAGCGTGGACCCAGCGCTATGGACGCGGTGAGCGGGGCCAGCGTTCT
GCTCCCGCTCTGGCCCGAGGCCTTCCCGTCTGGTCACAGGGGCCCTAGCCCACGGCGTGG
AGGGTCCTCTCTTTGGAGGGGTCTGGCAGGGCCTTCGATGGCTTTGCCTCTTCTTTTCAG
TGGAGGAGGCGGCTCGCTGCTCTCGGCCTGGGACAGACGCTGGGACCACGTTGGCCGGGG
CCCTGGCTCGTGCGTGTGTGATGTGTGTATGCTCAGTATCCGGCATCTATGCAAAAGCGG
TGGCGCTGCCTGGGCAGCTCTGCGCGGTGGAGGCACAGCGGCCTGCTGGCTCGGGCTCCA
GGCCCTGACTGCAGGGCATAGACAGTGGGGCTGACG
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Blue-coloured subsequences are predicted RNA structures by RNAz
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ATTGGCAGGACCCTGTGTCTTACCCCTCCCTCTGGCCTGGGGGCCACTCTGGTTCTGCCA
AGGTTGCTCGCCCACCCCCGCTGCTCTGACAGCTGCTGCCTGACTTGGGGTCTCCGCCCT
TCCTCTCTGTGCCCTCTGCCCCAGGGGGGACACCTGCATGTACTGGGGGTGGGCAGCCGG
GCCAGCCATAGAGGGAGGAGCCCCTCTGCCACCTGCTTTGTGCCTCTGAAGCTCCCCCTC
CTTGCTCAAGGCCTCAGACCAGCCATCCTCTGTGGAGCACCCCCATCCCAGCTGAACCAA
ACCCGAACTCGGGGGGCCAGGCCAGACTGCCCCACAGGACCCTGGGGTTGTGACACGGAG
GGGCAGTGGATAAACCTAATCCAAAGGTGAGCCAGGACTGGTCACGGACCCCGCCTCCTG
TGCCATGTACTCCCGGAGCCGCGTTAGACATAGTCCAAGCTTTGCCGAGAAAATAAATGT
ATTACTATATTTGACGACATAAAATCTATATATTTTTCACCATTGGAATCTAGTCAAGCT
GCGTAGCTCCTCTGCTCCTGTCCGCGTCTTGCTGTCTGTGGCCTTCCTACTGTGTCTTAT
GTTTTGGTGGACGTGATCAGCCTGGGGCTGTGTGCTCTGCTCTGTCCCTGTGGCCAGAGG
AGCCACGCGTGAAGAGCGTGGACCCAGCGCTATGGACGCGGTGAGCGGGGCCAGCGTTCT
GCTCCCGCTCTGGCCCGAGGCCTTCCCGTCTGGTCACAGGGGCCCTAGCCCACGGCGTGG
AGGGTCCTCTCTTTGGAGGGGTCTGGCAGGGCCTTCGATGGCTTTGCCTCTTCTTTTCAG
TGGAGGAGGCGGCTCGCTGCTCTCGGCCTGGGACAGACGCTGGGACCACGTTGGCCGGGG
CCCTGGCTCGTGCGTGTGTGATGTGTGTATGCTCAGTATCCGGCATCTATGCAAAAGCGG
TGGCGCTGCCTGGGCAGCTCTGCGCGGTGGAGGCACAGCGGCCTGCTGGCTCGGGCTCCA
GGCCCTGACTGCAGGGCATAGACAGTGGGGCTGACG
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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176-360, - strand, RNAmicro p=0.99926 |
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719-787, + strand, RNAmicro p=0.93955 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
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176-360, - strand, RNAmicro p=0.99926 |
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719-787, + strand, RNAmicro p=0.93955 |
Human gene identifier and UTR site,
human gene reading direction
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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fhi (0.169578) |
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eru (0.120048) |
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fhi (0.169578) |
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eru (0.120048) |